Analysis of interatomic Contacts of Structural Units in PDB entry:
7WOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WOG entry

There are 3 chains in PDB entry 7WOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ILE 332LYS 528
A
 GLU 1SER 124
B
 ASP 1ARG 112
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 7WOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
337 342Right-handed alpha
Helix 2
AA2
C
365 370Right-handed alpha
Helix 3
AA3
C
385 390Right-handed 310
Helix 4
AA4
A
87 91Right-handed 310
Helix 5
AA5
B
82 86Right-handed 310
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There are 7 sheets in PDB entry 7WOG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
356 358first strand
Strand 2
C
394 402anti-parallel
Strand 3
C
508 512anti-parallel
Strand 4
C
435 437anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
356 358first strand
Strand 2
C
394 402anti-parallel
Strand 3
C
515 516anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
78 84anti-parallel
Strand 3
A
68 73anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
45 51anti-parallel
Strand 3
A
34 39anti-parallel
Strand 4
A
92 97anti-parallel
Strand 5
A
116 118anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
106 110parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
35 39anti-parallel
Strand 5
B
45 47anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 12first strand
Strand 2
B
106 110parallel
Strand 3
B
87 94anti-parallel
Strand 4
B
100 101anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 23first strand
Strand 2
B
73 78anti-parallel
Strand 3
B
63 68anti-parallel
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