Analysis of interatomic Contacts of Structural Units in PDB entry:
7WP9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WP9 entry

There are 3 chains in PDB entry 7WP9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 17	SER 1144
B	ASN 17	SER 1144
C	ASN 17	SER 1144

There are 57 helices in PDB entry 7WP9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	291	301	Right-handed alpha
Helix 2	AA2	A	334	340	Right-handed alpha
Helix 3	AA3	A	380	384	Right-handed 310
Helix 4	AA4	A	415	420	Right-handed alpha
Helix 5	AA5	A	734	739	Right-handed alpha
Helix 6	AA6	A	743	750	Right-handed alpha
Helix 7	AA7	A	751	754	Right-handed 310
Helix 8	AA8	A	757	780	Right-handed alpha
Helix 9	AA9	A	813	820	Right-handed alpha
Helix 10	AB1	A	846	853	Right-handed 310
Helix 11	AB2	A	863	881	Right-handed alpha
Helix 12	AB3	A	883	888	Right-handed alpha
Helix 13	AB4	A	894	906	Right-handed alpha
Helix 14	AB5	A	910	916	Right-handed alpha
Helix 15	AB6	A	916	937	Right-handed alpha
Helix 16	AB7	A	942	962	Right-handed alpha
Helix 17	AB8	A	973	979	Right-handed alpha
Helix 18	AB9	A	985	988	Right-handed 310
Helix 19	AC1	A	989	1030	Right-handed alpha
Helix 20	AC2	A	1139	1144	Right-handed alpha
Helix 21	AC3	B	291	300	Right-handed alpha
Helix 22	AC4	B	335	340	Right-handed alpha
Helix 23	AC5	B	361	366	Right-handed alpha
Helix 24	AC6	B	380	384	Right-handed 310
Helix 25	AC7	B	734	740	Right-handed alpha
Helix 26	AC8	B	744	753	Right-handed 310
Helix 27	AC9	B	755	779	Right-handed alpha
Helix 28	AD1	B	815	821	Right-handed alpha
Helix 29	AD2	B	846	853	Right-handed 310
Helix 30	AD3	B	863	881	Right-handed alpha
Helix 31	AD4	B	894	905	Right-handed alpha
Helix 32	AD5	B	910	916	Right-handed alpha
Helix 33	AD6	B	916	937	Right-handed alpha
Helix 34	AD7	B	942	962	Right-handed alpha
Helix 35	AD8	B	973	981	Right-handed alpha
Helix 36	AD9	B	982	984	Right-handed 310
Helix 37	AE1	B	985	1030	Right-handed alpha
Helix 38	AE2	B	1138	1143	Right-handed alpha
Helix 39	AE3	C	291	301	Right-handed alpha
Helix 40	AE4	C	334	340	Right-handed alpha
Helix 41	AE5	C	361	368	Right-handed alpha
Helix 42	AE6	C	381	386	Right-handed 310
Helix 43	AE7	C	734	740	Right-handed alpha
Helix 44	AE8	C	749	753	Right-handed 310
Helix 45	AE9	C	756	780	Right-handed alpha
Helix 46	AF1	C	813	823	Right-handed alpha
Helix 47	AF2	C	850	853	Right-handed 310
Helix 48	AF3	C	863	881	Right-handed alpha
Helix 49	AF4	C	883	887	Right-handed 310
Helix 50	AF5	C	894	904	Right-handed alpha
Helix 51	AF6	C	910	916	Right-handed alpha
Helix 52	AF7	C	916	936	Right-handed alpha
Helix 53	AF8	C	942	961	Right-handed alpha
Helix 54	AF9	C	962	964	Right-handed 310
Helix 55	AG1	C	973	981	Right-handed alpha
Helix 56	AG2	C	982	1030	Right-handed alpha
Helix 57	AG3	C	1139	1143	Right-handed 310

There are 49 sheets in PDB entry 7WP9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	31	first strand
Strand 2	A	60	65	anti-parallel
Strand 3	A	262	266	anti-parallel
Strand 4	A	88	93	anti-parallel
Strand 5	A	184	191	anti-parallel
Strand 6	A	196	203	anti-parallel
Strand 7	A	221	222	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	51	first strand
Strand 2	A	272	276	anti-parallel
Strand 3	A	282	287	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	268	269	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	83	first strand
Strand 2	A	234	238	anti-parallel
Strand 3	A	101	105	anti-parallel
Strand 4	A	115	119	anti-parallel
Strand 5	A	124	133	anti-parallel
Strand 6	A	155	167	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	308	316	first strand
Strand 2	A	589	596	anti-parallel
Strand 3	A	606	610	anti-parallel
Strand 4	A	645	648	anti-parallel
Strand 5	A	639	642	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	325	first strand
Strand 2	A	535	540	parallel
Strand 3	A	543	551	anti-parallel
Strand 4	A	582	585	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	351	355	first strand
Strand 2	A	392	399	anti-parallel
Strand 3	A	505	511	anti-parallel
Strand 4	A	428	431	anti-parallel
Strand 5	A	376	377	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	449	450	first strand
Strand 2	A	490	491	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	570	573	first strand
Strand 2	A	562	564	anti-parallel
Strand 3	B	42	43	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	651	657	first strand
Strand 2	A	687	694	parallel
Strand 3	A	667	673	anti-parallel
Strand 4	A	661	662	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	698	701	first strand
Strand 2	B	784	787	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	725	first strand
Strand 2	A	1056	1075	anti-parallel
Strand 3	A	1044	1053	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	725	first strand
Strand 2	A	1056	1075	anti-parallel
Strand 3	A	1091	1094	anti-parallel
Strand 4	A	1099	1102	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	730	733	first strand
Strand 2	A	855	858	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	784	786	first strand
Strand 2	C	698	700	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1117	1122	first strand
Strand 2	A	1083	1087	anti-parallel
Strand 3	A	1078	1079	anti-parallel
Strand 4	A	1130	1131	parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	64	anti-parallel
Strand 3	B	263	266	anti-parallel
Strand 4	B	88	91	anti-parallel
Strand 5	B	186	190	anti-parallel
Strand 6	B	197	201	anti-parallel
Strand 7	B	221	222	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	268	276	anti-parallel
Strand 3	B	282	287	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	82	83	first strand
Strand 2	B	234	238	anti-parallel
Strand 3	B	101	105	anti-parallel
Strand 4	B	115	117	anti-parallel
Strand 5	B	124	128	anti-parallel
Strand 6	B	163	167	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	93	94	first strand
Strand 2	B	183	184	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	316	first strand
Strand 2	B	589	596	anti-parallel
Strand 3	B	606	610	anti-parallel
Strand 4	B	645	648	anti-parallel
Strand 5	B	639	641	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	322	325	first strand
Strand 2	B	535	540	parallel
Strand 3	B	543	550	anti-parallel
Strand 4	B	583	585	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	355	first strand
Strand 2	B	392	394	anti-parallel
Strand 3	B	504	511	anti-parallel
Strand 4	B	429	433	anti-parallel
Strand 5	B	373	376	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	353	355	first strand
Strand 2	B	392	394	anti-parallel
Strand 3	B	504	511	anti-parallel
Strand 4	B	397	400	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	570	573	first strand
Strand 2	B	562	564	anti-parallel
Strand 3	C	42	43	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	651	652	first strand
Strand 2	B	687	693	parallel
Strand 3	B	667	673	anti-parallel
Strand 4	B	661	664	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	698	700	first strand
Strand 2	C	784	786	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	725	first strand
Strand 2	B	1056	1075	anti-parallel
Strand 3	B	1044	1053	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	725	first strand
Strand 2	B	1056	1075	anti-parallel
Strand 3	B	1091	1094	anti-parallel
Strand 4	B	1099	1102	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	730	733	first strand
Strand 2	B	855	858	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1117	1122	first strand
Strand 2	B	1083	1087	anti-parallel
Strand 3	B	1078	1079	anti-parallel
Strand 4	B	1130	1131	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	60	63	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	49	first strand
Strand 2	C	268	276	anti-parallel
Strand 3	C	52	55	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	49	first strand
Strand 2	C	268	276	anti-parallel
Strand 3	C	282	287	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	82	83	first strand
Strand 2	C	234	237	anti-parallel
Strand 3	C	102	105	anti-parallel
Strand 4	C	114	117	anti-parallel
Strand 5	C	124	129	anti-parallel
Strand 6	C	163	167	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	221	222	first strand
Strand 2	C	195	203	anti-parallel
Strand 3	C	184	192	anti-parallel
Strand 4	C	88	90	anti-parallel
Strand 5	C	265	266	anti-parallel

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There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	308	316	first strand
Strand 2	C	589	596	anti-parallel
Strand 3	C	606	610	anti-parallel
Strand 4	C	645	648	anti-parallel
Strand 5	C	639	642	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	355	first strand
Strand 2	C	392	393	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	358	359	first strand
Strand 2	C	521	522	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	396	399	first strand
Strand 2	C	505	508	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	428	429	first strand
Strand 2	C	510	511	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	449	451	first strand
Strand 2	C	489	491	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	470	471	first strand
Strand 2	C	485	486	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	535	540	first strand
Strand 2	C	543	551	anti-parallel
Strand 3	C	581	585	anti-parallel
Strand 4	C	572	574	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	651	652	first strand
Strand 2	C	687	693	parallel
Strand 3	C	667	673	anti-parallel
Strand 4	C	661	664	anti-parallel

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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	710	725	first strand
Strand 2	C	1056	1071	anti-parallel
Strand 3	C	1044	1053	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	730	733	first strand
Strand 2	C	855	858	anti-parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1073	1075	first strand
Strand 2	C	1091	1094	anti-parallel
Strand 3	C	1099	1102	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1117	1119	first strand
Strand 2	C	1084	1087	anti-parallel
Strand 3	C	1078	1079	anti-parallel
Strand 4	C	1130	1131	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WP9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WP9