Analysis of interatomic Contacts of Structural Units in PDB entry:
7WQW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WQW entry

There are 2 chains in PDB entry 7WQW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 524LYS 784
B
 ILE 785HIS 1019
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 7WQW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
671 675Right-handed 310
Helix 2
AA2
A
708 719Right-handed alpha
Helix 3
AA3
B
833 835Right-handed 310
Helix 4
AA4
B
937 945Right-handed alpha
Helix 5
AA5
B
1010 1019Right-handed alpha
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There are 7 sheets in PDB entry 7WQW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
537 538first strand
Strand 2
A
626 630anti-parallel
Strand 3
A
565 572anti-parallel
Strand 4
A
605 606anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
551 557first strand
Strand 2
A
611 617anti-parallel
Strand 3
A
579 583anti-parallel
Strand 4
A
594 596anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
688 689first strand
Strand 2
A
765 766anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
693 694first strand
Strand 2
A
699 700anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
702 703first strand
Strand 2
A
739 742parallel
Strand 3
A
750 752anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
789 790first strand
Strand 2
B
929 934anti-parallel
Strand 3
B
909 914anti-parallel
Strand 4
B
974 978anti-parallel
Strand 5
B
983 992anti-parallel
Strand 6
B
1002 1005anti-parallel
Strand 7
B
954 957anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
799 804first strand
Strand 2
B
808 814anti-parallel
Strand 3
B
819 822anti-parallel
Strand 4
B
878 882anti-parallel
Strand 5
B
855 864anti-parallel
Strand 6
B
837 841anti-parallel
Strand 7
B
799 804anti-parallel
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