Analysis of interatomic Contacts of Structural Units in PDB entry:
7WQX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WQX entry

There is 1 chain in PDB entry 7WQX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 519HIS 1019
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7WQX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
659 661Right-handed 310
Helix 2
AA2
A
711 719Right-handed alpha
Helix 3
AA3
A
833 835Right-handed 310
Helix 4
AA4
A
937 945Right-handed alpha
Helix 5
AA5
A
1007 1009Right-handed 310
Helix 6
AA6
A
1010 1019Right-handed alpha
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There are 9 sheets in PDB entry 7WQX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 530first strand
Strand 2
A
555 557parallel
Strand 3
A
611 617anti-parallel
Strand 4
A
551 553anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
529 530first strand
Strand 2
A
555 557parallel
Strand 3
A
611 617anti-parallel
Strand 4
A
579 583anti-parallel
Strand 5
A
594 596anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 538first strand
Strand 2
A
626 634anti-parallel
Strand 3
A
563 572anti-parallel
Strand 4
A
605 606anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 649first strand
Strand 2
A
655 657anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
688 689first strand
Strand 2
A
765 767anti-parallel
Strand 3
A
724 727anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
693 695first strand
Strand 2
A
698 700anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
740 742first strand
Strand 2
A
750 752anti-parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 804first strand
Strand 2
A
812 814anti-parallel
Strand 3
A
819 822anti-parallel
Strand 4
A
878 882anti-parallel
Strand 5
A
855 864anti-parallel
Strand 6
A
837 841anti-parallel
Strand 7
A
799 804anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
909 914first strand
Strand 2
A
929 936anti-parallel
Strand 3
A
954 957anti-parallel
Strand 4
A
1002 1005anti-parallel
Strand 5
A
988 991anti-parallel
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