Analysis of interatomic Contacts of Structural Units in PDB entry:
7WRN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WRN entry

There is 1 chain in PDB entry 7WRN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3ALA 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7WRN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
61 69Right-handed alpha
Helix 3
AA3
A
71 77Right-handed alpha
Helix 4
AA4
A
80 97Right-handed alpha
Helix 5
AA5
A
98 101Right-handed 310
Helix 6
AA6
A
111 116Right-handed alpha
Helix 7
AA7
A
117 125Right-handed alpha
Helix 8
AA8
A
130 133Right-handed 310
Helix 9
AA9
A
139 147Right-handed alpha
Helix 10
AB1
A
152 156Right-handed 310
Helix 11
AB2
A
157 165Right-handed alpha
Helix 12
AB3
A
169 173Right-handed 310
Helix 13
AB4
A
177 193Right-handed alpha
Helix 14
AB5
A
222 224Right-handed 310
Helix 15
AB6
A
237 245Right-handed alpha
Helix 16
AB7
A
275 284Right-handed alpha
Helix 17
AB8
A
301 309Right-handed alpha
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There are 3 sheets in PDB entry 7WRN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
30 39anti-parallel
Strand 3
A
49 52anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 45first strand
Strand 2
A
30 39anti-parallel
Strand 3
A
7 15anti-parallel
Strand 4
A
104 108parallel
Strand 5
A
135 138parallel
Strand 6
A
204 205anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 259first strand
Strand 2
A
265 273anti-parallel
Strand 3
A
226 230anti-parallel
Strand 4
A
293 299anti-parallel
Strand 5
A
288 290anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il