Analysis of interatomic Contacts of Structural Units in PDB entry:
7WRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WRV entry

There are 3 chains in PDB entry 7WRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ASN 331LYS 529
U
 GLN 1SER 122
V
 ASP 268ILE 373
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7WRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
338 343Right-handed alpha
Helix 2
AA2
C
365 370Right-handed alpha
Helix 3
AA3
C
383 389Right-handed 310
Helix 4
AA4
C
405 410Right-handed 310
Helix 5
AA5
C
416 422Right-handed alpha
Helix 6
AA6
C
438 443Right-handed alpha
Helix 7
AA7
C
502 505Right-handed 310
Helix 8
AA8
U
28 32Right-handed 310
Helix 9
AA9
U
87 91Right-handed 310
Helix 10
AB1
V
346 350Right-handed 310
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There are 9 sheets in PDB entry 7WRV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
354 358first strand
Strand 2
C
395 403anti-parallel
Strand 3
C
507 515anti-parallel
Strand 4
C
431 437anti-parallel
Strand 5
C
376 380anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
361 362first strand
Strand 2
C
524 525parallel
Strand 3
C
391 392anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
452 454first strand
Strand 2
C
492 494anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
3 6first strand
Strand 2
U
21 25anti-parallel
Strand 3
U
78 83anti-parallel
Strand 4
U
68 73anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
10 12first strand
Strand 2
U
117 121parallel
Strand 3
U
92 99anti-parallel
Strand 4
U
34 39anti-parallel
Strand 5
U
45 52anti-parallel
Strand 6
U
57 60anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
10 12first strand
Strand 2
U
117 121parallel
Strand 3
U
92 99anti-parallel
Strand 4
U
110 113anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
271 274first strand
Strand 2
V
286 296anti-parallel
Strand 3
V
329 342anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
277 279first strand
Strand 2
V
369 372parallel
Strand 3
V
352 357anti-parallel
Strand 4
V
300 305anti-parallel
Strand 5
V
312 315anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
V
277 279first strand
Strand 2
V
369 372parallel
Strand 3
V
352 357anti-parallel
Strand 4
V
364 365anti-parallel
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