Analysis of interatomic Contacts of Structural Units in PDB entry:
7WRZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WRZ entry

There are 3 chains in PDB entry 7WRZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	VAL 2	SER 120
L	GLU 1	LYS 109
R	LEU 335	LYS 527

There are 9 helices in PDB entry 7WRZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	L	81	85	Right-handed 310
Helix 2	AA2	R	338	343	Right-handed alpha
Helix 3	AA3	R	349	353	Right-handed 310
Helix 4	AA4	R	365	370	Right-handed alpha
Helix 5	AA5	R	383	390	Right-handed 310
Helix 6	AA6	R	405	410	Right-handed 310
Helix 7	AA7	R	416	422	Right-handed alpha
Helix 8	AA8	R	438	443	Right-handed alpha
Helix 9	AA9	R	502	505	Right-handed 310

There are 8 sheets in PDB entry 7WRZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	114	118	parallel
Strand 3	H	92	98	anti-parallel
Strand 4	H	109	111	anti-parallel
Strand 5	H	3	6	parallel
Strand 6	H	22	23	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	10	12	first strand
Strand 2	H	114	118	parallel
Strand 3	H	92	98	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	45	52	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	18	20	first strand
Strand 2	H	79	83	anti-parallel
Strand 3	H	68	72	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	72	77	anti-parallel
Strand 4	L	64	69	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	13	first strand
Strand 2	L	104	108	parallel
Strand 3	L	87	92	anti-parallel
Strand 4	L	35	40	anti-parallel
Strand 5	L	47	51	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	356	358	first strand
Strand 2	R	395	403	anti-parallel
Strand 3	R	507	515	anti-parallel
Strand 4	R	431	437	anti-parallel
Strand 5	R	376	380	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	452	454	first strand
Strand 2	R	492	494	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	473	474	first strand
Strand 2	R	488	489	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WRZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WRZ