Analysis of interatomic Contacts of Structural Units in PDB entry:
7WS6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WS6 entry

There are 3 chains in PDB entry 7WS6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ARG 319ASN 536
H
 ASP 1LYS 108
I
 GLU 1SER 125
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7WS6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
338 343Right-handed alpha
Helix 2
AA2
C
365 370Right-handed alpha
Helix 3
AA3
C
383 389Right-handed 310
Helix 4
AA4
C
406 410Right-handed 310
Helix 5
AA5
C
416 422Right-handed alpha
Helix 6
AA6
C
502 506Right-handed 310
Helix 7
AA7
I
62 65Right-handed 310
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There are 10 sheets in PDB entry 7WS6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
354 358first strand
Strand 2
C
395 402anti-parallel
Strand 3
C
508 515anti-parallel
Strand 4
C
431 437anti-parallel
Strand 5
C
376 380anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
361 362first strand
Strand 2
C
524 525parallel
Strand 3
C
391 392anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
452 454first strand
Strand 2
C
492 494anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
4 6first strand
Strand 2
H
19 25anti-parallel
Strand 3
H
70 75anti-parallel
Strand 4
H
63 65anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 13first strand
Strand 2
H
104 107parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
53 54first strand
Strand 2
H
45 49anti-parallel
Strand 3
H
33 38anti-parallel
Strand 4
H
85 90anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
4 7first strand
Strand 2
I
18 24anti-parallel
Strand 3
I
78 83anti-parallel
Strand 4
I
68 73anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
11 12first strand
Strand 2
I
120 121parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
58 60first strand
Strand 2
I
45 51anti-parallel
Strand 3
I
34 39anti-parallel
Strand 4
I
93 99anti-parallel
Strand 5
I
110 112anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
58 60first strand
Strand 2
I
45 51anti-parallel
Strand 3
I
34 39anti-parallel
Strand 4
I
93 99anti-parallel
Strand 5
I
117 118anti-parallel
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