Analysis of interatomic Contacts of Structural Units in PDB entry:
7WSF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WSF entry

There are 2 chains in PDB entry 7WSF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ASN 711
B
 ASN 321GLU 506
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7WSF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 53Right-handed alpha
Helix 2
AA2
A
56 81Right-handed alpha
Helix 3
AA3
A
90 101Right-handed alpha
Helix 4
AA4
A
103 108Right-handed 310
Helix 5
AA5
A
109 129Right-handed alpha
Helix 6
AA6
A
145 153Right-handed alpha
Helix 7
AA7
A
156 193Right-handed alpha
Helix 8
AA8
A
197 203Right-handed alpha
Helix 9
AA9
A
204 207Right-handed 310
Helix 10
AB1
A
217 251Right-handed alpha
Helix 11
AB2
A
264 266Right-handed 310
Helix 12
AB3
A
274 276Right-handed 310
Helix 13
AB4
A
277 282Right-handed alpha
Helix 14
AB5
A
292 298Right-handed alpha
Helix 15
AB6
A
302 317Right-handed alpha
Helix 16
AB7
A
323 330Right-handed alpha
Helix 17
AB8
A
364 384Right-handed alpha
Helix 18
AB9
A
385 387Right-handed 310
Helix 19
AC1
A
388 392Right-handed 310
Helix 20
AC2
A
398 412Right-handed alpha
Helix 21
AC3
A
413 420Right-handed alpha
Helix 22
AC4
A
430 446Right-handed alpha
Helix 23
AC5
A
448 464Right-handed alpha
Helix 24
AC6
A
471 481Right-handed alpha
Helix 25
AC7
A
498 501Right-handed 310
Helix 26
AC8
A
502 507Right-handed alpha
Helix 27
AC9
A
512 532Right-handed alpha
Helix 28
AD1
A
537 541Right-handed 310
Helix 29
AD2
A
546 558Right-handed alpha
Helix 30
AD3
A
564 574Right-handed alpha
Helix 31
AD4
A
580 587Right-handed alpha
Helix 32
AD5
A
587 598Right-handed alpha
Helix 33
AD6
A
638 657Right-handed alpha
Helix 34
AD7
A
695 706Right-handed alpha
Helix 35
AD8
B
325 330Right-handed alpha
Helix 36
AD9
B
352 358Right-handed alpha
Helix 37
AE1
B
371 375Right-handed 310
Helix 38
AE2
B
393 397Right-handed 310
Helix 39
AE3
B
403 409Right-handed alpha
Helix 40
AE4
B
425 430Right-handed alpha
Helix 41
AE5
B
488 492Right-handed 310
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There are 7 sheets in PDB entry 7WSF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
140 142anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
486 487parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 351first strand
Strand 2
A
354 358anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 620first strand
Strand 2
A
679 686anti-parallel
Strand 3
A
669 675anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 620first strand
Strand 2
A
679 686anti-parallel
Strand 3
A
689 693anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 345first strand
Strand 2
B
382 389anti-parallel
Strand 3
B
494 501anti-parallel
Strand 4
B
418 424anti-parallel
Strand 5
B
363 367anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 441first strand
Strand 2
B
478 480anti-parallel
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