Analysis of interatomic Contacts of Structural Units in PDB entry:
7WSS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WSS entry

There are 2 chains in PDB entry 7WSS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 90GLY 622
B
 GLU 90GLY 622
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7WSS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
93 98Right-handed 310
Helix 2
AA2
A
101 113Right-handed alpha
Helix 3
AA3
A
113 118Right-handed alpha
Helix 4
AA4
A
119 123Right-handed 310
Helix 5
AA5
A
124 132Right-handed alpha
Helix 6
AA6
A
133 151Right-handed alpha
Helix 7
AA7
A
156 176Right-handed alpha
Helix 8
AA8
A
184 199Right-handed alpha
Helix 9
AA9
A
206 223Right-handed alpha
Helix 10
AB1
A
225 228Right-handed 310
Helix 11
AB2
A
229 240Right-handed alpha
Helix 12
AB3
A
241 246Right-handed alpha
Helix 13
AB4
A
247 255Right-handed alpha
Helix 14
AB5
A
255 264Right-handed alpha
Helix 15
AB6
A
267 274Right-handed alpha
Helix 16
AB7
A
277 289Right-handed alpha
Helix 17
AB8
A
290 294Right-handed 310
Helix 18
AB9
A
298 312Right-handed alpha
Helix 19
AC1
A
313 315Right-handed 310
Helix 20
AC2
A
320 335Right-handed alpha
Helix 21
AC3
A
341 356Right-handed alpha
Helix 22
AC4
A
357 362Right-handed 310
Helix 23
AC5
A
365 375Right-handed alpha
Helix 24
AC6
A
393 416Right-handed alpha
Helix 25
AC7
A
437 450Right-handed alpha
Helix 26
AC8
A
489 503Right-handed alpha
Helix 27
AC9
A
515 529Right-handed alpha
Helix 28
AD1
A
532 541Right-handed alpha
Helix 29
AD2
A
546 552Right-handed alpha
Helix 30
AD3
A
559 578Right-handed alpha
Helix 31
AD4
A
578 590Right-handed alpha
Helix 32
AD5
A
593 608Right-handed alpha
Helix 33
AD6
A
608 622Right-handed alpha
Helix 34
AD7
B
93 98Right-handed 310
Helix 35
AD8
B
101 118Right-handed alpha
Helix 36
AD9
B
119 123Right-handed 310
Helix 37
AE1
B
124 132Right-handed alpha
Helix 38
AE2
B
133 150Right-handed alpha
Helix 39
AE3
B
156 176Right-handed alpha
Helix 40
AE4
B
184 199Right-handed alpha
Helix 41
AE5
B
206 223Right-handed alpha
Helix 42
AE6
B
225 228Right-handed 310
Helix 43
AE7
B
229 240Right-handed alpha
Helix 44
AE8
B
241 246Right-handed alpha
Helix 45
AE9
B
247 255Right-handed alpha
Helix 46
AF1
B
255 264Right-handed alpha
Helix 47
AF2
B
267 274Right-handed alpha
Helix 48
AF3
B
277 289Right-handed alpha
Helix 49
AF4
B
290 294Right-handed 310
Helix 50
AF5
B
298 312Right-handed alpha
Helix 51
AF6
B
313 315Right-handed 310
Helix 52
AF7
B
320 335Right-handed alpha
Helix 53
AF8
B
341 356Right-handed alpha
Helix 54
AF9
B
357 361Right-handed 310
Helix 55
AG1
B
365 375Right-handed alpha
Helix 56
AG2
B
393 416Right-handed alpha
Helix 57
AG3
B
437 450Right-handed alpha
Helix 58
AG4
B
489 503Right-handed alpha
Helix 59
AG5
B
515 529Right-handed alpha
Helix 60
AG6
B
532 541Right-handed alpha
Helix 61
AG7
B
546 552Right-handed alpha
Helix 62
AG8
B
559 578Right-handed alpha
Helix 63
AG9
B
578 591Right-handed alpha
Helix 64
AH1
B
593 608Right-handed alpha
Helix 65
AH2
B
608 622Right-handed alpha
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There are 3 sheets in PDB entry 7WSS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 380first strand
Strand 2
A
385 389anti-parallel
Strand 3
A
430 435parallel
Strand 4
A
472 477parallel
Strand 5
A
458 460anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 380first strand
Strand 2
A
385 389anti-parallel
Strand 3
A
430 435parallel
Strand 4
A
472 477parallel
Strand 5
A
487 488anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 380first strand
Strand 2
B
385 389anti-parallel
Strand 3
B
430 435parallel
Strand 4
B
472 476parallel
Strand 5
B
458 460anti-parallel
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