Analysis of interatomic Contacts of Structural Units in PDB entry:
7WSW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WSW entry

There are 4 chains in PDB entry 7WSW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 6	MET 510
B	VAL 49	MET 510
D	VAL 49	MET 510
C	LEU 6	MET 510

There are 90 helices in PDB entry 7WSW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	14	Right-handed alpha
Helix 2	AA2	A	54	62	Right-handed alpha
Helix 3	AA3	A	62	82	Right-handed alpha
Helix 4	AA4	A	86	107	Right-handed alpha
Helix 5	AA5	A	108	110	Right-handed 310
Helix 6	AA6	A	123	136	Right-handed alpha
Helix 7	AA7	A	136	142	Right-handed alpha
Helix 8	AA8	A	145	153	Right-handed alpha
Helix 9	AA9	A	160	167	Right-handed 310
Helix 10	AB1	A	168	180	Right-handed alpha
Helix 11	AB2	A	185	215	Right-handed alpha
Helix 12	AB3	A	218	222	Right-handed 310
Helix 13	AB4	A	235	252	Right-handed alpha
Helix 14	AB5	A	263	293	Right-handed alpha
Helix 15	AB6	A	296	315	Right-handed alpha
Helix 16	AB7	A	321	347	Right-handed alpha
Helix 17	AB8	A	351	368	Right-handed alpha
Helix 18	AB9	A	377	386	Right-handed alpha
Helix 19	AC1	A	440	447	Right-handed alpha
Helix 20	AC2	A	467	476	Right-handed alpha
Helix 21	AC3	A	480	494	Right-handed alpha
Helix 22	AC4	A	498	510	Right-handed alpha
Helix 23	AC5	B	57	82	Right-handed alpha
Helix 24	AC6	B	86	107	Right-handed alpha
Helix 25	AC7	B	108	110	Right-handed 310
Helix 26	AC8	B	127	132	Right-handed alpha
Helix 27	AC9	B	135	142	Right-handed alpha
Helix 28	AD1	B	145	153	Right-handed alpha
Helix 29	AD2	B	156	162	Right-handed alpha
Helix 30	AD3	B	163	167	Right-handed 310
Helix 31	AD4	B	168	180	Right-handed alpha
Helix 32	AD5	B	186	215	Right-handed alpha
Helix 33	AD6	B	230	234	Right-handed 310
Helix 34	AD7	B	235	252	Right-handed alpha
Helix 35	AD8	B	263	296	Right-handed alpha
Helix 36	AD9	B	296	316	Right-handed alpha
Helix 37	AE1	B	319	336	Right-handed alpha
Helix 38	AE2	B	339	348	Right-handed alpha
Helix 39	AE3	B	353	363	Right-handed alpha
Helix 40	AE4	B	364	369	Right-handed alpha
Helix 41	AE5	B	379	387	Right-handed alpha
Helix 42	AE6	B	440	446	Right-handed alpha
Helix 43	AE7	B	467	477	Right-handed alpha
Helix 44	AE8	B	477	492	Right-handed alpha
Helix 45	AE9	B	498	509	Right-handed alpha
Helix 46	AF1	D	57	82	Right-handed alpha
Helix 47	AF2	D	86	107	Right-handed alpha
Helix 48	AF3	D	108	110	Right-handed 310
Helix 49	AF4	D	127	132	Right-handed alpha
Helix 50	AF5	D	135	142	Right-handed alpha
Helix 51	AF6	D	145	153	Right-handed alpha
Helix 52	AF7	D	156	162	Right-handed alpha
Helix 53	AF8	D	163	167	Right-handed 310
Helix 54	AF9	D	168	180	Right-handed alpha
Helix 55	AG1	D	186	215	Right-handed alpha
Helix 56	AG2	D	230	234	Right-handed 310
Helix 57	AG3	D	235	252	Right-handed alpha
Helix 58	AG4	D	263	296	Right-handed alpha
Helix 59	AG5	D	296	316	Right-handed alpha
Helix 60	AG6	D	319	336	Right-handed alpha
Helix 61	AG7	D	339	348	Right-handed alpha
Helix 62	AG8	D	353	363	Right-handed alpha
Helix 63	AG9	D	364	369	Right-handed alpha
Helix 64	AH1	D	379	387	Right-handed alpha
Helix 65	AH2	D	440	446	Right-handed alpha
Helix 66	AH3	D	467	477	Right-handed alpha
Helix 67	AH4	D	477	492	Right-handed alpha
Helix 68	AH5	D	498	509	Right-handed alpha
Helix 69	AH6	C	7	14	Right-handed alpha
Helix 70	AH7	C	54	62	Right-handed alpha
Helix 71	AH8	C	62	82	Right-handed alpha
Helix 72	AH9	C	86	107	Right-handed alpha
Helix 73	AI1	C	108	110	Right-handed 310
Helix 74	AI2	C	123	136	Right-handed alpha
Helix 75	AI3	C	136	142	Right-handed alpha
Helix 76	AI4	C	145	153	Right-handed alpha
Helix 77	AI5	C	160	167	Right-handed 310
Helix 78	AI6	C	168	180	Right-handed alpha
Helix 79	AI7	C	185	215	Right-handed alpha
Helix 80	AI8	C	218	222	Right-handed 310
Helix 81	AI9	C	235	252	Right-handed alpha
Helix 82	AJ1	C	263	293	Right-handed alpha
Helix 83	AJ2	C	296	315	Right-handed alpha
Helix 84	AJ3	C	321	347	Right-handed alpha
Helix 85	AJ4	C	351	368	Right-handed alpha
Helix 86	AJ5	C	377	386	Right-handed alpha
Helix 87	AJ6	C	440	447	Right-handed alpha
Helix 88	AJ7	C	467	476	Right-handed alpha
Helix 89	AJ8	C	480	494	Right-handed alpha
Helix 90	AJ9	C	498	510	Right-handed alpha

There are 8 sheets in PDB entry 7WSW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	393	first strand
Strand 2	A	460	466	anti-parallel
Strand 3	A	408	414	anti-parallel
Strand 4	A	438	439	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	400	first strand
Strand 2	A	453	456	anti-parallel
Strand 3	A	417	421	anti-parallel
Strand 4	A	428	433	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	389	393	first strand
Strand 2	B	460	466	anti-parallel
Strand 3	B	408	414	anti-parallel
Strand 4	B	437	439	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	398	400	first strand
Strand 2	B	453	456	anti-parallel
Strand 3	B	417	422	anti-parallel
Strand 4	B	427	433	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	389	393	first strand
Strand 2	D	460	466	anti-parallel
Strand 3	D	408	414	anti-parallel
Strand 4	D	438	439	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	398	400	first strand
Strand 2	D	453	456	anti-parallel
Strand 3	D	417	422	anti-parallel
Strand 4	D	427	433	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	390	393	first strand
Strand 2	C	460	466	anti-parallel
Strand 3	C	408	414	anti-parallel
Strand 4	C	438	439	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	397	400	first strand
Strand 2	C	453	456	anti-parallel
Strand 3	C	417	421	anti-parallel
Strand 4	C	428	433	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WSW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WSW