Analysis of interatomic Contacts of Structural Units in PDB entry:
7WSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WSX entry

There are 4 chains in PDB entry 7WSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 88GLY 346
A
 ASP 348GLU 491
B
 ALA 89GLY 346
B
 ASP 348VAL 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 7WSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
88 115Right-handed alpha
Helix 2
AA2
A
119 132Right-handed alpha
Helix 3
AA3
A
140 171Right-handed alpha
Helix 4
AA4
A
194 205Right-handed alpha
Helix 5
AA5
A
216 223Right-handed 310
Helix 6
AA6
A
224 229Right-handed alpha
Helix 7
AA7
A
240 242Right-handed 310
Helix 8
AA8
A
243 250Right-handed alpha
Helix 9
AA9
A
269 271Right-handed 310
Helix 10
AB1
A
292 302Right-handed alpha
Helix 11
AB2
A
318 324Right-handed alpha
Helix 12
AB3
A
325 335Right-handed alpha
Helix 13
AB4
A
351 354Right-handed 310
Helix 14
AB5
A
355 364Right-handed alpha
Helix 15
AB6
A
375 380Right-handed 310
Helix 16
AB7
A
399 401Right-handed 310
Helix 17
AB8
A
402 418Right-handed alpha
Helix 18
AB9
A
420 424Right-handed 310
Helix 19
AC1
A
437 447Right-handed alpha
Helix 20
AC2
A
463 475Right-handed alpha
Helix 21
AC3
A
481 491Right-handed alpha
Helix 22
AC4
B
90 115Right-handed alpha
Helix 23
AC5
B
119 132Right-handed alpha
Helix 24
AC6
B
140 171Right-handed alpha
Helix 25
AC7
B
194 205Right-handed alpha
Helix 26
AC8
B
216 223Right-handed 310
Helix 27
AC9
B
224 229Right-handed alpha
Helix 28
AD1
B
240 242Right-handed 310
Helix 29
AD2
B
243 251Right-handed alpha
Helix 30
AD3
B
269 271Right-handed 310
Helix 31
AD4
B
292 302Right-handed alpha
Helix 32
AD5
B
318 324Right-handed alpha
Helix 33
AD6
B
325 335Right-handed alpha
Helix 34
AD7
B
351 354Right-handed 310
Helix 35
AD8
B
355 364Right-handed alpha
Helix 36
AD9
B
375 380Right-handed 310
Helix 37
AE1
B
399 401Right-handed 310
Helix 38
AE2
B
402 418Right-handed alpha
Helix 39
AE3
B
420 424Right-handed 310
Helix 40
AE4
B
433 447Right-handed alpha
Helix 41
AE5
B
458 463Right-handed 310
Helix 42
AE6
B
464 475Right-handed alpha
Helix 43
AE7
B
481 491Right-handed alpha
Back to top of page

There are 9 sheets in PDB entry 7WSX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 180first strand
Strand 2
A
311 315anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 236first strand
Strand 2
A
211 215parallel
Strand 3
A
187 191parallel
Strand 4
A
254 257parallel
Strand 5
A
273 275parallel
Strand 6
A
285 286parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 398first strand
Strand 2
A
368 373parallel
Strand 3
A
340 346parallel
Strand 4
A
426 431parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
391 392anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 179first strand
Strand 2
B
312 315anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 236first strand
Strand 2
B
211 215parallel
Strand 3
B
187 191parallel
Strand 4
B
254 257parallel
Strand 5
B
273 275parallel
Strand 6
B
285 286parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
394 398first strand
Strand 2
B
368 373parallel
Strand 3
B
340 346parallel
Strand 4
B
426 431parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 388first strand
Strand 2
B
391 392anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
453 454first strand
Strand 2
B
477 478parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il