Analysis of interatomic Contacts of Structural Units in PDB entry:
7WUG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WUG entry

There are 5 chains in PDB entry 7WUG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
5	ALA 4	LYS 919
8	PHE 27	GLU 454
1	ASP 16	ASN 957
4	ARG 91	ALA 362
Y	THR 3	ASP 681

There are 90 helices in PDB entry 7WUG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	5	6	17	Right-handed alpha
Helix 2	AA2	5	21	30	Right-handed alpha
Helix 3	AA3	5	34	41	Right-handed alpha
Helix 4	AA4	5	47	62	Right-handed alpha
Helix 5	AA5	5	65	73	Right-handed alpha
Helix 6	AA6	5	73	86	Right-handed alpha
Helix 7	AA7	5	97	115	Right-handed alpha
Helix 8	AA8	5	122	137	Right-handed alpha
Helix 9	AA9	5	144	160	Right-handed alpha
Helix 10	AB1	5	187	205	Right-handed alpha
Helix 11	AB2	5	207	211	Right-handed 310
Helix 12	AB3	5	254	272	Right-handed alpha
Helix 13	AB4	5	284	295	Right-handed alpha
Helix 14	AB5	5	299	311	Right-handed alpha
Helix 15	AB6	5	312	317	Right-handed alpha
Helix 16	AB7	5	323	338	Right-handed alpha
Helix 17	AB8	5	348	364	Right-handed alpha
Helix 18	AB9	5	368	376	Right-handed alpha
Helix 19	AC1	5	378	391	Right-handed alpha
Helix 20	AC2	5	397	415	Right-handed alpha
Helix 21	AC3	5	418	427	Right-handed alpha
Helix 22	AC4	5	430	452	Right-handed alpha
Helix 23	AC5	5	452	457	Right-handed alpha
Helix 24	AC6	5	473	489	Right-handed alpha
Helix 25	AC7	5	490	496	Right-handed alpha
Helix 26	AC8	5	500	521	Right-handed alpha
Helix 27	AC9	5	522	524	Right-handed 310
Helix 28	AD1	5	525	547	Right-handed alpha
Helix 29	AD2	5	553	560	Right-handed alpha
Helix 30	AD3	5	561	571	Right-handed alpha
Helix 31	AD4	5	585	593	Right-handed alpha
Helix 32	AD5	5	597	612	Right-handed alpha
Helix 33	AD6	5	616	627	Right-handed alpha
Helix 34	AD7	5	628	635	Right-handed alpha
Helix 35	AD8	5	636	638	Right-handed 310
Helix 36	AD9	5	640	656	Right-handed alpha
Helix 37	AE1	5	658	669	Right-handed alpha
Helix 38	AE2	5	690	700	Right-handed alpha
Helix 39	AE3	5	706	724	Right-handed alpha
Helix 40	AE4	5	727	737	Right-handed alpha
Helix 41	AE5	5	738	749	Right-handed alpha
Helix 42	AE6	5	761	776	Right-handed alpha
Helix 43	AE7	5	778	787	Right-handed alpha
Helix 44	AE8	5	869	887	Right-handed alpha
Helix 45	AE9	5	887	897	Right-handed alpha
Helix 46	AF1	5	900	919	Right-handed alpha
Helix 47	AF2	8	35	54	Right-handed alpha
Helix 48	AF3	8	88	100	Right-handed alpha
Helix 49	AF4	8	102	113	Right-handed alpha
Helix 50	AF5	8	118	130	Right-handed alpha
Helix 51	AF6	8	130	144	Right-handed alpha
Helix 52	AF7	8	145	157	Right-handed alpha
Helix 53	AF8	8	159	164	Right-handed alpha
Helix 54	AF9	8	193	212	Right-handed alpha
Helix 55	AG1	8	220	234	Right-handed alpha
Helix 56	AG2	8	234	241	Right-handed alpha
Helix 57	AG3	8	241	256	Right-handed alpha
Helix 58	AG4	8	280	308	Right-handed alpha
Helix 59	AG5	8	352	357	Right-handed 310
Helix 60	AG6	8	394	403	Right-handed alpha
Helix 61	AG7	8	417	422	Right-handed alpha
Helix 62	AG8	8	423	426	Right-handed 310
Helix 63	AG9	8	427	446	Right-handed alpha
Helix 64	AH1	1	17	27	Right-handed alpha
Helix 65	AH2	1	30	35	Right-handed 310
Helix 66	AH3	1	36	47	Right-handed alpha
Helix 67	AH4	1	81	92	Right-handed alpha
Helix 68	AH5	1	117	125	Right-handed alpha
Helix 69	AH6	1	327	332	Right-handed alpha
Helix 70	AH7	1	497	504	Right-handed alpha
Helix 71	AH8	1	596	614	Right-handed alpha
Helix 72	AH9	1	708	725	Right-handed alpha
Helix 73	AI1	1	727	742	Right-handed alpha
Helix 74	AI2	1	752	772	Right-handed alpha
Helix 75	AI3	1	914	932	Right-handed alpha
Helix 76	AI4	1	944	949	Right-handed 310
Helix 77	AI5	1	950	955	Right-handed alpha
Helix 78	AI6	4	92	97	Right-handed alpha
Helix 79	AI7	4	212	222	Right-handed alpha
Helix 80	AI8	4	223	232	Right-handed alpha
Helix 81	AI9	4	270	277	Right-handed alpha
Helix 82	AJ1	4	281	285	Right-handed 310
Helix 83	AJ2	Y	94	102	Right-handed alpha
Helix 84	AJ3	Y	186	196	Right-handed alpha
Helix 85	AJ4	Y	280	297	Right-handed alpha
Helix 86	AJ5	Y	307	315	Right-handed alpha
Helix 87	AJ6	Y	319	328	Right-handed alpha
Helix 88	AJ7	Y	336	346	Right-handed alpha
Helix 89	AJ8	Y	543	553	Right-handed alpha
Helix 90	AJ9	Y	589	593	Right-handed 310

There are 16 sheets in PDB entry 7WUG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	216	217	first strand
Strand 2	1	110	111	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	8	32	33	first strand
Strand 2	8	448	449	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	8	330	331	first strand
Strand 2	8	415	416	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	347	349	first strand
Strand 2	1	357	359	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	396	399	first strand
Strand 2	1	571	577	anti-parallel
Strand 3	1	432	438	anti-parallel
Strand 4	1	509	513	anti-parallel
Strand 5	1	518	519	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	557	563	first strand
Strand 2	1	549	554	anti-parallel
Strand 3	1	538	544	anti-parallel
Strand 4	1	411	420	anti-parallel
Strand 5	1	582	586	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	687	688	first strand
Strand 2	1	691	692	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	340	341	first strand
Strand 2	4	326	332	anti-parallel
Strand 3	4	344	346	anti-parallel
Strand 4	4	128	135	anti-parallel
Strand 5	4	138	149	anti-parallel
Strand 6	4	163	171	anti-parallel
Strand 7	4	179	187	anti-parallel
Strand 8	4	287	297	anti-parallel
Strand 9	4	315	321	anti-parallel
Strand 10	4	326	332	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	32	35	first strand
Strand 2	Y	22	29	anti-parallel
Strand 3	Y	6	12	anti-parallel
Strand 4	Y	675	680	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	158	161	first strand
Strand 2	Y	53	59	anti-parallel
Strand 3	Y	79	83	anti-parallel
Strand 4	Y	88	93	anti-parallel
Strand 5	Y	109	112	anti-parallel
Strand 6	Y	237	239	parallel
Strand 7	Y	212	213	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	128	134	first strand
Strand 2	Y	137	142	anti-parallel
Strand 3	Y	146	151	anti-parallel
Strand 4	Y	242	245	anti-parallel
Strand 5	Y	350	351	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	164	165	first strand
Strand 2	Y	613	621	parallel
Strand 3	Y	625	636	anti-parallel
Strand 4	Y	608	610	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	164	165	first strand
Strand 2	Y	613	621	parallel
Strand 3	Y	625	636	anti-parallel
Strand 4	Y	640	648	anti-parallel
Strand 5	Y	655	664	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	252	255	first strand
Strand 2	Y	262	266	anti-parallel
Strand 3	Y	273	277	anti-parallel
Strand 4	Y	354	359	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	441	448	first strand
Strand 2	Y	484	490	anti-parallel
Strand 3	Y	494	498	anti-parallel
Strand 4	Y	508	511	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	559	561	first strand
Strand 2	Y	567	571	anti-parallel
Strand 3	Y	576	580	anti-parallel
Strand 4	Y	598	601	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WUG

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WUG