Analysis of interatomic Contacts of Structural Units in PDB entry:
7WUI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WUI entry

There are 8 chains in PDB entry 7WUI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 13	LEU 394
B	GLU 3	ASN 340
G	SER 8	ARG 62
N	GLN 1	VAL 126
R	GLN 616	ARG 883
S	VAL 2	LEU 245
L	ILE 599	SER 600
L	GLY 602	ARG 609

There are 35 helices in PDB entry 7WUI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	39	Right-handed alpha
Helix 2	AA2	A	52	61	Right-handed alpha
Helix 3	AA3	A	234	239	Right-handed 310
Helix 4	AA4	A	267	278	Right-handed alpha
Helix 5	AA5	A	281	285	Right-handed 310
Helix 6	AA6	A	293	302	Right-handed alpha
Helix 7	AA7	A	307	312	Right-handed alpha
Helix 8	AA8	A	313	316	Right-handed 310
Helix 9	AA9	A	331	350	Right-handed alpha
Helix 10	AB1	A	370	391	Right-handed alpha
Helix 11	AB2	B	4	25	Right-handed alpha
Helix 12	AB3	B	29	34	Right-handed alpha
Helix 13	AB4	G	9	21	Right-handed alpha
Helix 14	AB5	G	29	34	Right-handed alpha
Helix 15	AB6	G	34	43	Right-handed alpha
Helix 16	AB7	N	28	32	Right-handed 310
Helix 17	AB8	R	617	644	Right-handed alpha
Helix 18	AB9	R	645	650	Right-handed 310
Helix 19	AC1	R	651	680	Right-handed alpha
Helix 20	AC2	R	682	716	Right-handed alpha
Helix 21	AC3	R	725	735	Right-handed alpha
Helix 22	AC4	R	735	747	Right-handed alpha
Helix 23	AC5	R	749	751	Right-handed 310
Helix 24	AC6	R	774	782	Right-handed alpha
Helix 25	AC7	R	782	792	Right-handed alpha
Helix 26	AC8	R	793	810	Right-handed alpha
Helix 27	AC9	R	824	834	Right-handed alpha
Helix 28	AD1	R	836	842	Right-handed 310
Helix 29	AD2	R	850	862	Right-handed alpha
Helix 30	AD3	R	862	872	Right-handed alpha
Helix 31	AD4	R	875	883	Right-handed alpha
Helix 32	AD5	S	28	32	Right-handed 310
Helix 33	AD6	S	53	56	Right-handed 310
Helix 34	AD7	S	87	91	Right-handed 310
Helix 35	AD8	L	600	604	Right-handed 310

There are 18 sheets in PDB entry 7WUI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	208	213	first strand
Strand 2	A	218	223	anti-parallel
Strand 3	A	43	46	parallel
Strand 4	A	243	249	parallel
Strand 5	A	287	292	parallel
Strand 6	A	360	363	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	52	first strand
Strand 2	B	335	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	62	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	102	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	135	140	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	157	161	anti-parallel
Strand 3	B	165	169	anti-parallel
Strand 4	B	176	181	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	260	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	285	289	anti-parallel
Strand 3	B	294	297	anti-parallel
Strand 4	B	304	308	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	7	first strand
Strand 2	N	21	25	anti-parallel
Strand 3	N	78	79	anti-parallel
Strand 4	N	72	73	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	10	11	first strand
Strand 2	N	122	125	parallel
Strand 3	N	93	95	anti-parallel
Strand 4	N	34	39	anti-parallel
Strand 5	N	45	51	anti-parallel
Strand 6	N	58	60	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	18	19	first strand
Strand 2	N	82	83	anti-parallel
Strand 3	N	68	69	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	753	754	first strand
Strand 2	R	771	772	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	3	6	first strand
Strand 2	S	22	25	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	58	60	first strand
Strand 2	S	45	51	anti-parallel
Strand 3	S	33	39	anti-parallel
Strand 4	S	98	99	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	58	60	first strand
Strand 2	S	45	51	anti-parallel
Strand 3	S	33	39	anti-parallel
Strand 4	S	93	95	anti-parallel
Strand 5	S	115	116	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	68	73	first strand
Strand 2	S	78	83	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	141	142	first strand
Strand 2	S	156	160	anti-parallel
Strand 3	S	211	216	anti-parallel
Strand 4	S	203	207	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	194	195	first strand
Strand 2	S	186	190	anti-parallel
Strand 3	S	174	179	anti-parallel
Strand 4	S	226	231	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WUI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WUI