Analysis of interatomic Contacts of Structural Units in PDB entry:
7WUJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WUJ entry

There are 6 chains in PDB entry 7WUJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 10	LEU 394
B	LEU 7	ASN 340
E	THR 2722	ILE 2999
S	VAL 2	GLU 246
Y	SER 8	GLU 63
N	GLN 1	TYR 117

There are 33 helices in PDB entry 7WUJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	39	Right-handed alpha
Helix 2	AA2	A	52	64	Right-handed alpha
Helix 3	AA3	A	235	239	Right-handed 310
Helix 4	AA4	A	267	278	Right-handed alpha
Helix 5	AA5	A	296	302	Right-handed alpha
Helix 6	AA6	A	312	316	Right-handed 310
Helix 7	AA7	A	331	347	Right-handed alpha
Helix 8	AA8	A	370	391	Right-handed alpha
Helix 9	AA9	B	11	25	Right-handed alpha
Helix 10	AB1	B	29	34	Right-handed alpha
Helix 11	AB2	B	35	37	Right-handed 310
Helix 12	AB3	E	2723	2727	Right-handed 310
Helix 13	AB4	E	2739	2758	Right-handed alpha
Helix 14	AB5	E	2758	2763	Right-handed alpha
Helix 15	AB6	E	2769	2773	Right-handed 310
Helix 16	AB7	E	2774	2803	Right-handed alpha
Helix 17	AB8	E	2805	2838	Right-handed alpha
Helix 18	AB9	E	2848	2858	Right-handed alpha
Helix 19	AC1	E	2859	2872	Right-handed alpha
Helix 20	AC2	E	2873	2877	Right-handed 310
Helix 21	AC3	E	2891	2896	Right-handed alpha
Helix 22	AC4	E	2898	2925	Right-handed alpha
Helix 23	AC5	E	2935	2943	Right-handed alpha
Helix 24	AC6	E	2951	2953	Right-handed 310
Helix 25	AC7	E	2954	2960	Right-handed alpha
Helix 26	AC8	E	2965	2975	Right-handed alpha
Helix 27	AC9	E	2977	2987	Right-handed alpha
Helix 28	AD1	E	2992	2998	Right-handed alpha
Helix 29	AD2	S	28	32	Right-handed 310
Helix 30	AD3	Y	9	14	Right-handed alpha
Helix 31	AD4	Y	16	21	Right-handed alpha
Helix 32	AD5	Y	29	44	Right-handed alpha
Helix 33	AD6	N	87	91	Right-handed 310

There are 16 sheets in PDB entry 7WUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	213	first strand
Strand 2	A	218	224	anti-parallel
Strand 3	A	40	45	parallel
Strand 4	A	243	245	parallel
Strand 5	A	287	288	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	249	first strand
Strand 2	A	291	292	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	49	50	first strand
Strand 2	B	336	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	89	94	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	135	140	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	153	first strand
Strand 2	B	156	160	anti-parallel
Strand 3	B	166	170	anti-parallel
Strand 4	B	175	180	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	191	192	first strand
Strand 2	B	198	202	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	235	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	260	264	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	275	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	19	23	first strand
Strand 2	S	78	83	anti-parallel
Strand 3	S	68	73	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	59	60	first strand
Strand 2	S	45	51	anti-parallel
Strand 3	S	33	39	anti-parallel
Strand 4	S	97	99	anti-parallel
Strand 5	S	110	111	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	92	94	first strand
Strand 2	S	115	117	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	159	160	first strand
Strand 2	S	211	214	anti-parallel
Strand 3	S	205	207	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	185	189	first strand
Strand 2	S	174	179	anti-parallel
Strand 3	S	229	231	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	3	5	first strand
Strand 2	N	18	25	anti-parallel
Strand 3	N	78	83	anti-parallel
Strand 4	N	68	73	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	36	39	first strand
Strand 2	N	93	96	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WUJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WUJ