Analysis of interatomic Contacts of Structural Units in PDB entry:
7WV9

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WV9 entry

There are 5 chains in PDB entry 7WV9 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 4	PHE 355
B	GLU 3	ASN 340
C	ALA 7	GLU 63
R	GLU 106	MET 411
S	VAL 2	LEU 235

There are 29 helices in PDB entry 7WV9. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	13	Right-handed alpha
Helix 2	AA2	A	14	27	Right-handed alpha
Helix 3	AA3	A	29	31	Right-handed 310
Helix 4	AA4	A	45	54	Right-handed alpha
Helix 5	AA5	A	212	217	Right-handed 310
Helix 6	AA6	A	242	256	Right-handed alpha
Helix 7	AA7	A	257	261	Right-handed 310
Helix 8	AA8	A	271	279	Right-handed alpha
Helix 9	AA9	A	283	288	Right-handed alpha
Helix 10	AB1	A	296	310	Right-handed alpha
Helix 11	AB2	A	333	353	Right-handed alpha
Helix 12	AB3	B	4	26	Right-handed alpha
Helix 13	AB4	B	29	35	Right-handed alpha
Helix 14	AB5	B	279	282	Right-handed 310
Helix 15	AB6	C	8	24	Right-handed alpha
Helix 16	AB7	C	29	44	Right-handed alpha
Helix 17	AB8	R	112	142	Right-handed alpha
Helix 18	AB9	R	145	149	Right-handed 310
Helix 19	AC1	R	150	179	Right-handed alpha
Helix 20	AC2	R	185	220	Right-handed alpha
Helix 21	AC3	R	223	228	Right-handed alpha
Helix 22	AC4	R	229	255	Right-handed alpha
Helix 23	AC5	R	272	312	Right-handed alpha
Helix 24	AC6	R	335	357	Right-handed alpha
Helix 25	AC7	R	358	369	Right-handed alpha
Helix 26	AC8	R	372	398	Right-handed alpha
Helix 27	AC9	R	401	411	Right-handed alpha
Helix 28	AD1	S	53	56	Right-handed 310
Helix 29	AD2	S	74	77	Right-handed 310

There are 13 sheets in PDB entry 7WV9. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	192	first strand
Strand 2	A	195	201	anti-parallel
Strand 3	A	33	37	parallel
Strand 4	A	221	226	parallel
Strand 5	A	264	269	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	50	first strand
Strand 2	B	337	339	anti-parallel
Strand 3	B	327	328	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	62	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	151	first strand
Strand 2	B	157	160	anti-parallel
Strand 3	B	166	168	anti-parallel
Strand 4	B	178	180	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	207	212	anti-parallel
Strand 4	B	218	223	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	249	254	anti-parallel
Strand 4	B	260	265	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	277	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	304	307	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	317	first strand
Strand 2	B	330	331	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	5	7	first strand
Strand 2	S	19	23	anti-parallel
Strand 3	S	78	83	anti-parallel
Strand 4	S	68	73	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	11	12	first strand
Strand 2	S	115	119	parallel
Strand 3	S	92	99	anti-parallel
Strand 4	S	33	39	anti-parallel
Strand 5	S	46	51	anti-parallel
Strand 6	S	58	60	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	129	130	first strand
Strand 2	S	143	148	anti-parallel
Strand 3	S	199	204	anti-parallel
Strand 4	S	191	196	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	173	174	first strand
Strand 2	S	166	167	anti-parallel
Strand 3	S	214	215	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WV9

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WV9