Analysis of interatomic Contacts of Structural Units in PDB entry:
7WVG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WVG entry

There are 4 chains in PDB entry 7WVG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11LYS 330
B
 ALA 5ASP 174
C
 GLN 31SER 154
D
 GLU 43LYS 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 7WVG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 73Right-handed alpha
Helix 2
AA2
A
107 116Right-handed alpha
Helix 3
AA3
A
128 132Right-handed 310
Helix 4
AA4
A
191 200Right-handed alpha
Helix 5
AA5
B
8 12Right-handed 310
Helix 6
AA6
B
37 58Right-handed alpha
Helix 7
AA7
B
74 127Right-handed alpha
Helix 8
AA8
B
145 154Right-handed alpha
Helix 9
AA9
B
162 174Right-handed alpha
Helix 10
AB1
C
58 62Right-handed 310
Helix 11
AB2
C
92 95Right-handed 310
Helix 12
AB3
C
117 121Right-handed 310
Helix 13
AB4
D
121 125Right-handed 310
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There are 15 sheets in PDB entry 7WVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 36first strand
Strand 2
B
22 28anti-parallel
Strand 3
A
12 17anti-parallel
Strand 4
B
137 140anti-parallel
Strand 5
B
130 132anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
34 35anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
319 321anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 44first strand
Strand 2
A
298 299parallel
Strand 3
A
311 312parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
278 283parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
89 91parallel
Strand 3
A
271 273parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
118 125anti-parallel
Strand 3
A
260 266anti-parallel
Strand 4
A
180 188anti-parallel
Strand 5
A
255 258anti-parallel
Strand 6
A
157 159anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
118 125anti-parallel
Strand 3
A
260 266anti-parallel
Strand 4
A
180 188anti-parallel
Strand 5
A
233 241anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 173first strand
Strand 2
A
246 251anti-parallel
Strand 3
A
206 210anti-parallel
Strand 4
A
213 217anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 291first strand
Strand 2
A
285 287anti-parallel
Strand 3
A
306 307anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 37first strand
Strand 2
C
48 55anti-parallel
Strand 3
C
108 113anti-parallel
Strand 4
C
98 103anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 42first strand
Strand 2
C
149 153parallel
Strand 3
C
122 129anti-parallel
Strand 4
C
64 69anti-parallel
Strand 5
C
75 81anti-parallel
Strand 6
C
88 90anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 42first strand
Strand 2
C
149 153parallel
Strand 3
C
122 129anti-parallel
Strand 4
C
142 145anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 49first strand
Strand 2
D
61 67anti-parallel
Strand 3
D
112 117anti-parallel
Strand 4
D
104 109anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 55first strand
Strand 2
D
144 148parallel
Strand 3
D
127 132anti-parallel
Strand 4
D
75 80anti-parallel
Strand 5
D
87 91anti-parallel
Strand 6
D
95 96anti-parallel
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