Analysis of interatomic Contacts of Structural Units in PDB entry:
7WVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WVS entry

There are 2 chains in PDB entry 7WVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 10ALA 402
B
 SER 10ALA 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7WVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 28Right-handed alpha
Helix 2
AA2
A
32 51Right-handed alpha
Helix 3
AA3
A
52 76Right-handed alpha
Helix 4
AA4
A
77 82Right-handed alpha
Helix 5
AA5
A
90 98Right-handed alpha
Helix 6
AA6
A
100 114Right-handed alpha
Helix 7
AA7
A
131 136Right-handed 310
Helix 8
AA8
A
138 151Right-handed alpha
Helix 9
AA9
A
151 156Right-handed alpha
Helix 10
AB1
A
157 166Right-handed alpha
Helix 11
AB2
A
176 183Right-handed alpha
Helix 12
AB3
A
188 195Right-handed alpha
Helix 13
AB4
A
196 207Right-handed alpha
Helix 14
AB5
A
224 229Right-handed alpha
Helix 15
AB6
A
246 256Right-handed alpha
Helix 16
AB7
A
260 263Right-handed 310
Helix 17
AB8
A
269 280Right-handed alpha
Helix 18
AB9
A
281 286Right-handed alpha
Helix 19
AC1
A
311 315Right-handed 310
Helix 20
AC2
A
316 331Right-handed alpha
Helix 21
AC3
A
349 360Right-handed alpha
Helix 22
AC4
A
361 363Right-handed 310
Helix 23
AC5
A
368 379Right-handed alpha
Helix 24
AC6
B
11 27Right-handed alpha
Helix 25
AC7
B
32 51Right-handed alpha
Helix 26
AC8
B
52 76Right-handed alpha
Helix 27
AC9
B
77 82Right-handed alpha
Helix 28
AD1
B
90 98Right-handed alpha
Helix 29
AD2
B
100 114Right-handed alpha
Helix 30
AD3
B
131 136Right-handed 310
Helix 31
AD4
B
138 166Right-handed alpha
Helix 32
AD5
B
176 183Right-handed alpha
Helix 33
AD6
B
188 195Right-handed alpha
Helix 34
AD7
B
196 210Right-handed alpha
Helix 35
AD8
B
211 214Right-handed 310
Helix 36
AD9
B
224 232Right-handed alpha
Helix 37
AE1
B
246 256Right-handed alpha
Helix 38
AE2
B
260 263Right-handed 310
Helix 39
AE3
B
269 280Right-handed alpha
Helix 40
AE4
B
281 287Right-handed alpha
Helix 41
AE5
B
311 315Right-handed 310
Helix 42
AE6
B
316 331Right-handed alpha
Helix 43
AE7
B
349 360Right-handed alpha
Helix 44
AE8
B
368 379Right-handed alpha
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There are 4 sheets in PDB entry 7WVS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 89first strand
Strand 2
A
124 127anti-parallel
Strand 3
A
117 120anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
A
265 268parallel
Strand 3
A
238 241parallel
Strand 4
A
305 309parallel
Strand 5
A
336 342parallel
Strand 6
A
394 401anti-parallel
Strand 7
A
381 388anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
124 126anti-parallel
Strand 3
B
118 119anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 291first strand
Strand 2
B
265 268parallel
Strand 3
B
238 241parallel
Strand 4
B
305 309parallel
Strand 5
B
336 342parallel
Strand 6
B
394 401anti-parallel
Strand 7
B
381 388anti-parallel
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