Analysis of interatomic Contacts of Structural Units in PDB entry:
7WVW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WVW entry

There are 5 chains in PDB entry 7WVW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	TYR 2	LEU 7
R	SER 19	LEU 317
A	SER 6	PHE 355
B	GLU 3	ASN 340
C	THR 6	ARG 62

There are 25 helices in PDB entry 7WVW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	R	20	55	Right-handed alpha
Helix 2	AA2	R	58	87	Right-handed alpha
Helix 3	AA3	R	94	129	Right-handed alpha
Helix 4	AA4	R	129	136	Right-handed alpha
Helix 5	AA5	R	138	163	Right-handed alpha
Helix 6	AA6	R	186	209	Right-handed alpha
Helix 7	AA7	R	210	231	Right-handed alpha
Helix 8	AA8	R	237	267	Right-handed alpha
Helix 9	AA9	R	267	274	Right-handed alpha
Helix 10	AB1	R	278	303	Right-handed alpha
Helix 11	AB2	R	306	317	Right-handed alpha
Helix 12	AB3	A	7	32	Right-handed alpha
Helix 13	AB4	A	45	53	Right-handed alpha
Helix 14	AB5	A	208	217	Right-handed 310
Helix 15	AB6	A	229	232	Right-handed 310
Helix 16	AB7	A	242	256	Right-handed alpha
Helix 17	AB8	A	257	261	Right-handed 310
Helix 18	AB9	A	271	282	Right-handed alpha
Helix 19	AC1	A	283	287	Right-handed 310
Helix 20	AC2	A	296	312	Right-handed alpha
Helix 21	AC3	A	330	352	Right-handed alpha
Helix 22	AC4	B	4	26	Right-handed alpha
Helix 23	AC5	B	31	35	Right-handed 310
Helix 24	AC6	C	7	23	Right-handed alpha
Helix 25	AC7	C	29	44	Right-handed alpha

There are 10 sheets in PDB entry 7WVW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	164	168	first strand
Strand 2	R	174	178	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	195	201	anti-parallel
Strand 3	A	190	192	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	195	201	anti-parallel
Strand 3	A	34	39	parallel
Strand 4	A	221	227	parallel
Strand 5	A	264	270	parallel
Strand 6	A	320	324	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	52	first strand
Strand 2	B	335	340	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	105	first strand
Strand 2	B	111	114	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	135	139	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	176	181	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	198	203	anti-parallel
Strand 3	B	208	212	anti-parallel
Strand 4	B	218	222	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	232	234	first strand
Strand 2	B	240	243	anti-parallel
Strand 3	B	249	254	anti-parallel
Strand 4	B	259	265	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	304	308	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WVW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WVW