Analysis of interatomic Contacts of Structural Units in PDB entry:
7WW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WW2 entry

There are 2 chains in PDB entry 7WW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 29ARG 479
B
 ARG 29ASN 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7WW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 72Right-handed 310
Helix 2
AA2
A
95 101Right-handed 310
Helix 3
AA3
A
104 109Right-handed alpha
Helix 4
AA4
A
111 124Right-handed alpha
Helix 5
AA5
A
127 145Right-handed alpha
Helix 6
AA6
A
162 174Right-handed alpha
Helix 7
AA7
A
195 199Right-handed 310
Helix 8
AA8
A
201 217Right-handed alpha
Helix 9
AA9
A
238 253Right-handed alpha
Helix 10
AB1
A
263 275Right-handed alpha
Helix 11
AB2
A
277 285Right-handed alpha
Helix 12
AB3
A
301 312Right-handed alpha
Helix 13
AB4
A
318 325Right-handed alpha
Helix 14
AB5
A
331 339Right-handed alpha
Helix 15
AB6
A
356 373Right-handed alpha
Helix 16
AB7
A
378 387Right-handed alpha
Helix 17
AB8
A
387 394Right-handed alpha
Helix 18
AB9
A
426 434Right-handed alpha
Helix 19
AC1
A
459 476Right-handed alpha
Helix 20
AC2
B
66 71Right-handed 310
Helix 21
AC3
B
95 101Right-handed 310
Helix 22
AC4
B
104 108Right-handed 310
Helix 23
AC5
B
111 124Right-handed alpha
Helix 24
AC6
B
127 145Right-handed alpha
Helix 25
AC7
B
157 161Right-handed 310
Helix 26
AC8
B
162 174Right-handed alpha
Helix 27
AC9
B
187 191Right-handed 310
Helix 28
AD1
B
195 199Right-handed 310
Helix 29
AD2
B
201 217Right-handed alpha
Helix 30
AD3
B
238 253Right-handed alpha
Helix 31
AD4
B
263 275Right-handed alpha
Helix 32
AD5
B
277 285Right-handed alpha
Helix 33
AD6
B
301 312Right-handed alpha
Helix 34
AD7
B
318 325Right-handed alpha
Helix 35
AD8
B
331 339Right-handed alpha
Helix 36
AD9
B
356 373Right-handed alpha
Helix 37
AE1
B
378 387Right-handed alpha
Helix 38
AE2
B
387 394Right-handed alpha
Helix 39
AE3
B
426 434Right-handed alpha
Helix 40
AE4
B
459 476Right-handed alpha
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There are 6 sheets in PDB entry 7WW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
48 57anti-parallel
Strand 3
A
31 40anti-parallel
Strand 4
A
76 79parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 65first strand
Strand 2
A
48 57anti-parallel
Strand 3
A
31 40anti-parallel
Strand 4
A
83 87parallel
Strand 5
A
410 414anti-parallel
Strand 6
A
441 444anti-parallel
Strand 7
A
447 451anti-parallel
Strand 8
A
454 455anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
147 154parallel
Strand 3
A
176 183parallel
Strand 4
A
225 231parallel
Strand 5
A
255 260parallel
Strand 6
A
292 296parallel
Strand 7
A
314 317parallel
Strand 8
A
341 344parallel
Strand 9
A
89 91parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 65first strand
Strand 2
B
48 57anti-parallel
Strand 3
B
30 40anti-parallel
Strand 4
B
76 79parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 65first strand
Strand 2
B
48 57anti-parallel
Strand 3
B
30 40anti-parallel
Strand 4
B
83 87parallel
Strand 5
B
410 414anti-parallel
Strand 6
B
441 444anti-parallel
Strand 7
B
447 451anti-parallel
Strand 8
B
454 455anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 91first strand
Strand 2
B
147 151parallel
Strand 3
B
176 183parallel
Strand 4
B
225 231parallel
Strand 5
B
255 260parallel
Strand 6
B
292 296parallel
Strand 7
B
314 317parallel
Strand 8
B
341 344parallel
Strand 9
B
89 91parallel
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