Analysis of interatomic Contacts of Structural Units in PDB entry:
7WW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WW4 entry

There is 1 chain in PDB entry 7WW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LYS 483
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 7WW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 38Right-handed alpha
Helix 2
AA2
A
71 76Right-handed alpha
Helix 3
AA3
A
88 98Right-handed alpha
Helix 4
AA4
A
114 132Right-handed alpha
Helix 5
AA5
A
144 155Right-handed alpha
Helix 6
AA6
A
168 175Right-handed alpha
Helix 7
AA7
A
191 199Right-handed alpha
Helix 8
AA8
A
210 220Right-handed alpha
Helix 9
AA9
A
229 240Right-handed alpha
Helix 10
AB1
A
241 245Right-handed 310
Helix 11
AB2
A
272 276Right-handed 310
Helix 12
AB3
A
455 460Right-handed alpha
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There are 5 sheets in PDB entry 7WW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
41 48anti-parallel
Strand 3
A
103 108parallel
Strand 4
A
138 142parallel
Strand 5
A
160 162parallel
Strand 6
A
179 183parallel
Strand 7
A
202 206parallel
Strand 8
A
224 227parallel
Strand 9
A
11 13parallel
Strand 10
A
41 48parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 252first strand
Strand 2
A
471 482anti-parallel
Strand 3
A
296 301anti-parallel
Strand 4
A
290 293anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 252first strand
Strand 2
A
471 482anti-parallel
Strand 3
A
327 334anti-parallel
Strand 4
A
407 413anti-parallel
Strand 5
A
417 422anti-parallel
Strand 6
A
426 431anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
315 317anti-parallel
Strand 3
A
445 454anti-parallel
Strand 4
A
341 349anti-parallel
Strand 5
A
362 367anti-parallel
Strand 6
A
376 381anti-parallel
Strand 7
A
393 397anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 282first strand
Strand 2
A
311 313parallel
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