Analysis of interatomic Contacts of Structural Units in PDB entry:
7WWD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WWD entry

There is 1 chain in PDB entry 7WWD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6VAL 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7WWD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 26Right-handed alpha
Helix 2
AA2
A
91 103Right-handed alpha
Helix 3
AA3
A
107 119Right-handed alpha
Helix 4
AA4
A
122 138Right-handed alpha
Helix 5
AA5
A
139 155Right-handed alpha
Helix 6
AA6
A
157 167Right-handed alpha
Helix 7
AA7
A
186 189Right-handed 310
Helix 8
AA8
A
190 194Right-handed 310
Helix 9
AA9
A
195 212Right-handed alpha
Helix 10
AB1
A
232 236Right-handed 310
Helix 11
AB2
A
237 252Right-handed alpha
Helix 12
AB3
A
267 276Right-handed alpha
Helix 13
AB4
A
277 279Right-handed 310
Helix 14
AB5
A
280 286Right-handed alpha
Helix 15
AB6
A
292 298Right-handed alpha
Helix 16
AB7
A
301 305Right-handed 310
Helix 17
AB8
A
306 310Right-handed 310
Helix 18
AB9
A
328 332Right-handed 310
Helix 19
AC1
A
333 361Right-handed alpha
Helix 20
AC2
A
366 395Right-handed alpha
Helix 21
AC3
A
398 403Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7WWD.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 174first strand
Strand 2
A
180 184anti-parallel
Strand 3
A
222 227parallel
Strand 4
A
256 262parallel
Strand 5
A
287 290parallel
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