Analysis of interatomic Contacts of Structural Units in PDB entry:
7WWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WWH entry

There are 2 chains in PDB entry 7WWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1SER 251
B
 GLN 1SER 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7WWH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 25Right-handed 310
Helix 2
AA2
A
43 45Right-handed 310
Helix 3
AA3
A
46 58Right-handed alpha
Helix 4
AA4
A
76 80Right-handed 310
Helix 5
AA5
A
81 98Right-handed alpha
Helix 6
AA6
A
113 126Right-handed alpha
Helix 7
AA7
A
127 130Right-handed 310
Helix 8
AA8
A
141 153Right-handed alpha
Helix 9
AA9
A
171 179Right-handed alpha
Helix 10
AB1
A
181 187Right-handed alpha
Helix 11
AB2
A
206 216Right-handed alpha
Helix 12
AB3
A
217 219Right-handed 310
Helix 13
AB4
A
235 251Right-handed alpha
Helix 14
AB5
B
20 25Right-handed 310
Helix 15
AB6
B
43 45Right-handed 310
Helix 16
AB7
B
46 58Right-handed alpha
Helix 17
AB8
B
76 80Right-handed 310
Helix 18
AB9
B
81 98Right-handed alpha
Helix 19
AC1
B
113 126Right-handed alpha
Helix 20
AC2
B
127 130Right-handed 310
Helix 21
AC3
B
143 148Right-handed alpha
Helix 22
AC4
B
171 179Right-handed alpha
Helix 23
AC5
B
181 187Right-handed alpha
Helix 24
AC6
B
207 216Right-handed alpha
Helix 25
AC7
B
217 219Right-handed 310
Helix 26
AC8
B
235 251Right-handed alpha
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There are 4 sheets in PDB entry 7WWH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
11 18anti-parallel
Strand 3
A
61 65anti-parallel
Strand 4
A
28 34parallel
Strand 5
A
102 112parallel
Strand 6
A
132 136parallel
Strand 7
A
193 198parallel
Strand 8
A
221 226parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 164first strand
Strand 2
A
167 170anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 8first strand
Strand 2
B
11 18anti-parallel
Strand 3
B
61 65anti-parallel
Strand 4
B
28 34parallel
Strand 5
B
102 112parallel
Strand 6
B
132 136parallel
Strand 7
B
193 198parallel
Strand 8
B
221 226parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 164first strand
Strand 2
B
167 170anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il