Analysis of interatomic Contacts of Structural Units in PDB entry:
7WWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WWQ entry

There are 2 chains in PDB entry 7WWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 107GLY 560
B
 ILE 258ASN 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7WWQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
108 115Right-handed alpha
Helix 2
AA2
A
150 154Right-handed 310
Helix 3
AA3
A
164 170Right-handed alpha
Helix 4
AA4
A
230 245Right-handed alpha
Helix 5
AA5
A
292 303Right-handed alpha
Helix 6
AA6
A
337 351Right-handed alpha
Helix 7
AA7
A
388 397Right-handed alpha
Helix 8
AA8
A
476 480Right-handed 310
Helix 9
AA9
A
484 495Right-handed alpha
Helix 10
AB1
A
499 505Right-handed alpha
Helix 11
AB2
A
506 516Right-handed alpha
Helix 12
AB3
A
525 534Right-handed alpha
Helix 13
AB4
A
536 545Right-handed alpha
Helix 14
AB5
A
546 557Right-handed alpha
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There are 6 sheets in PDB entry 7WWQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
220 221parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 228first strand
Strand 2
A
265 274parallel
Strand 3
A
249 259anti-parallel
Strand 4
A
306 313anti-parallel
Strand 5
A
368 374parallel
Strand 6
A
380 387anti-parallel
Strand 7
A
449 455anti-parallel
Strand 8
A
225 228parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 281first strand
Strand 2
A
284 287anti-parallel
Strand 3
B
267 269anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 354first strand
Strand 2
A
362 365anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 401first strand
Strand 2
A
409 412anti-parallel
Strand 3
A
443 444anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 426first strand
Strand 2
A
438 439anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il