Analysis of interatomic Contacts of Structural Units in PDB entry:
7WWW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WWW entry

There is 1 chain in PDB entry 7WWW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3LEU 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 7WWW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 25Right-handed alpha
Helix 2
AA2
A
26 29Right-handed 310
Helix 3
AA3
A
41 51Right-handed alpha
Helix 4
AA4
A
83 87Right-handed 310
Helix 5
AA5
A
88 94Right-handed alpha
Helix 6
AA6
A
107 118Right-handed alpha
Helix 7
AA7
A
140 144Right-handed 310
Helix 8
AA8
A
155 172Right-handed alpha
Helix 9
AA9
A
206 210Right-handed 310
Helix 10
AB1
A
221 225Right-handed 310
Helix 11
AB2
A
226 230Right-handed 310
Helix 12
AB3
A
259 269Right-handed alpha
Helix 13
AB4
A
283 288Right-handed alpha
Helix 14
AB5
A
298 301Right-handed 310
Helix 15
AB6
A
321 338Right-handed alpha
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There are 3 sheets in PDB entry 7WWW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
68 71anti-parallel
Strand 3
A
74 79anti-parallel
Strand 4
A
32 37parallel
Strand 5
A
4 8parallel
Strand 6
A
97 100parallel
Strand 7
A
121 124parallel
Strand 8
A
150 152parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 215first strand
Strand 2
A
233 240anti-parallel
Strand 3
A
174 184parallel
Strand 4
A
246 254anti-parallel
Strand 5
A
309 318anti-parallel
Strand 6
A
294 296anti-parallel
Strand 7
A
275 277parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 215first strand
Strand 2
A
233 240anti-parallel
Strand 3
A
174 184parallel
Strand 4
A
246 254anti-parallel
Strand 5
A
309 318anti-parallel
Strand 6
A
302 306anti-parallel
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