Analysis of interatomic Contacts of Structural Units in PDB entry:
7WXH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WXH entry

There are 2 chains in PDB entry 7WXH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 347ASP 776
B
 PRO 347ASP 776
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7WXH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
348 363Right-handed alpha
Helix 2
AA2
A
368 384Right-handed alpha
Helix 3
AA3
A
384 401Right-handed alpha
Helix 4
AA4
A
405 412Right-handed alpha
Helix 5
AA5
A
415 433Right-handed alpha
Helix 6
AA6
A
471 483Right-handed alpha
Helix 7
AA7
A
495 513Right-handed alpha
Helix 8
AA8
A
527 534Right-handed alpha
Helix 9
AA9
A
546 557Right-handed alpha
Helix 10
AB1
A
579 592Right-handed alpha
Helix 11
AB2
A
609 613Right-handed 310
Helix 12
AB3
A
614 626Right-handed alpha
Helix 13
AB4
A
633 640Right-handed alpha
Helix 14
AB5
A
666 678Right-handed alpha
Helix 15
AB6
A
689 700Right-handed alpha
Helix 16
AB7
A
740 742Right-handed 310
Helix 17
AB8
A
757 761Right-handed 310
Helix 18
AB9
B
348 363Right-handed alpha
Helix 19
AC1
B
368 384Right-handed alpha
Helix 20
AC2
B
384 401Right-handed alpha
Helix 21
AC3
B
405 412Right-handed alpha
Helix 22
AC4
B
415 433Right-handed alpha
Helix 23
AC5
B
471 483Right-handed alpha
Helix 24
AC6
B
495 513Right-handed alpha
Helix 25
AC7
B
527 534Right-handed alpha
Helix 26
AC8
B
546 557Right-handed alpha
Helix 27
AC9
B
579 592Right-handed alpha
Helix 28
AD1
B
609 613Right-handed 310
Helix 29
AD2
B
614 626Right-handed alpha
Helix 30
AD3
B
633 640Right-handed alpha
Helix 31
AD4
B
666 678Right-handed alpha
Helix 32
AD5
B
689 700Right-handed alpha
Helix 33
AD6
B
740 742Right-handed 310
Helix 34
AD7
B
757 761Right-handed 310
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There are 10 sheets in PDB entry 7WXH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
744 750first strand
Strand 2
A
450 458anti-parallel
Strand 3
A
440 447anti-parallel
Strand 4
A
771 772anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
487 490first strand
Strand 2
A
461 465parallel
Strand 3
A
538 543parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
573 574first strand
Strand 2
A
605 607parallel
Strand 3
A
662 664parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
629 630first strand
Strand 2
A
658 659parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 728first strand
Strand 2
A
736 738anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
744 750first strand
Strand 2
B
450 458anti-parallel
Strand 3
B
440 447anti-parallel
Strand 4
B
771 772anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
487 490first strand
Strand 2
B
461 465parallel
Strand 3
B
538 543parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
573 574first strand
Strand 2
B
605 607parallel
Strand 3
B
662 664parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
629 630first strand
Strand 2
B
658 659parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
726 728first strand
Strand 2
B
736 738anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il