Analysis of interatomic Contacts of Structural Units in PDB entry:
7WXW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WXW entry

There are 5 chains in PDB entry 7WXW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
R	THR 567	SER 854
C	SER 8	GLU 63
A	LEU 12	LEU 394
D	GLN 1	SER 127
B	GLU 3	ASN 340

There are 34 helices in PDB entry 7WXW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	R	568	573	Right-handed 310
Helix 2	AA2	R	581	610	Right-handed alpha
Helix 3	AA3	R	617	646	Right-handed alpha
Helix 4	AA4	R	655	687	Right-handed alpha
Helix 5	AA5	R	694	707	Right-handed alpha
Helix 6	AA6	R	708	722	Right-handed alpha
Helix 7	AA7	R	723	725	Right-handed 310
Helix 8	AA8	R	744	767	Right-handed alpha
Helix 9	AA9	R	785	794	Right-handed alpha
Helix 10	AB1	R	795	801	Right-handed alpha
Helix 11	AB2	R	802	805	Right-handed 310
Helix 12	AB3	R	806	811	Right-handed alpha
Helix 13	AB4	R	818	828	Right-handed alpha
Helix 14	AB5	R	829	838	Right-handed alpha
Helix 15	AB6	R	842	854	Right-handed alpha
Helix 16	AB7	C	9	23	Right-handed alpha
Helix 17	AB8	C	31	44	Right-handed alpha
Helix 18	AB9	C	55	59	Right-handed 310
Helix 19	AC1	A	13	39	Right-handed alpha
Helix 20	AC2	A	52	61	Right-handed alpha
Helix 21	AC3	A	62	64	Right-handed 310
Helix 22	AC4	A	234	239	Right-handed 310
Helix 23	AC5	A	265	278	Right-handed alpha
Helix 24	AC6	A	293	304	Right-handed alpha
Helix 25	AC7	A	307	311	Right-handed 310
Helix 26	AC8	A	312	318	Right-handed 310
Helix 27	AC9	A	331	352	Right-handed alpha
Helix 28	AD1	A	370	390	Right-handed alpha
Helix 29	AD2	D	28	32	Right-handed 310
Helix 30	AD3	D	62	65	Right-handed 310
Helix 31	AD4	D	87	91	Right-handed 310
Helix 32	AD5	B	4	24	Right-handed alpha
Helix 33	AD6	B	29	34	Right-handed alpha
Helix 34	AD7	B	35	37	Right-handed 310

There are 10 sheets in PDB entry 7WXW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	214	first strand
Strand 2	A	217	222	anti-parallel
Strand 3	A	40	46	parallel
Strand 4	A	243	249	parallel
Strand 5	A	286	292	parallel
Strand 6	A	359	363	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	7	first strand
Strand 2	D	18	25	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	69	73	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	10	12	first strand
Strand 2	D	122	126	parallel
Strand 3	D	92	97	anti-parallel
Strand 4	D	34	39	anti-parallel
Strand 5	D	49	51	anti-parallel
Strand 6	D	58	60	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	336	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	135	140	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	151	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	175	181	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	187	192	first strand
Strand 2	B	199	203	anti-parallel
Strand 3	B	208	211	anti-parallel
Strand 4	B	218	222	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	241	245	anti-parallel
Strand 3	B	249	253	anti-parallel
Strand 4	B	260	264	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	303	308	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WXW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WXW