Analysis of interatomic Contacts of Structural Units in PDB entry:
7WYW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WYW entry

There are 8 chains in PDB entry 7WYW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 31	SER 375
A	LYS 377	TYR 1023
B	GLY 12	SER 305
G	GLU 4	CYS 43
C	ASP 31	SER 375
C	LYS 377	TYR 1023
D	GLY 12	SER 305
E	GLU 4	CYS 43

There are110 helices in PDB entry 7WYW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	33	38	Right-handed alpha
Helix 2	AA2	A	47	56	Right-handed alpha
Helix 3	AA3	A	64	76	Right-handed alpha
Helix 4	AA4	A	89	97	Right-handed alpha
Helix 5	AA5	A	99	122	Right-handed alpha
Helix 6	AA6	A	127	160	Right-handed alpha
Helix 7	AA7	A	183	185	Right-handed 310
Helix 8	AA8	A	261	264	Right-handed 310
Helix 9	AA9	A	265	276	Right-handed alpha
Helix 10	AB1	A	282	313	Right-handed alpha
Helix 11	AB2	A	316	331	Right-handed alpha
Helix 12	AB3	A	333	354	Right-handed alpha
Helix 13	AB4	A	361	364	Right-handed 310
Helix 14	AB5	A	365	370	Right-handed alpha
Helix 15	AB6	A	415	428	Right-handed alpha
Helix 16	AB7	A	450	464	Right-handed alpha
Helix 17	AB8	A	466	473	Right-handed alpha
Helix 18	AB9	A	510	516	Right-handed alpha
Helix 19	AC1	A	531	548	Right-handed alpha
Helix 20	AC2	A	598	609	Right-handed alpha
Helix 21	AC3	A	620	632	Right-handed alpha
Helix 22	AC4	A	640	649	Right-handed alpha
Helix 23	AC5	A	656	660	Right-handed 310
Helix 24	AC6	A	667	671	Right-handed alpha
Helix 25	AC7	A	674	685	Right-handed alpha
Helix 26	AC8	A	694	707	Right-handed alpha
Helix 27	AC9	A	718	720	Right-handed 310
Helix 28	AD1	A	721	728	Right-handed alpha
Helix 29	AD2	A	739	746	Right-handed alpha
Helix 30	AD3	A	756	782	Right-handed alpha
Helix 31	AD4	A	783	797	Right-handed alpha
Helix 32	AD5	A	803	812	Right-handed alpha
Helix 33	AD6	A	815	822	Right-handed alpha
Helix 34	AD7	A	823	825	Right-handed 310
Helix 35	AD8	A	846	854	Right-handed alpha
Helix 36	AD9	A	856	876	Right-handed alpha
Helix 37	AE1	A	879	884	Right-handed alpha
Helix 38	AE2	A	886	892	Right-handed alpha
Helix 39	AE3	A	907	939	Right-handed alpha
Helix 40	AE4	A	943	948	Right-handed alpha
Helix 41	AE5	A	951	971	Right-handed alpha
Helix 42	AE6	A	973	978	Right-handed alpha
Helix 43	AE7	A	986	990	Right-handed 310
Helix 44	AE8	A	991	1012	Right-handed alpha
Helix 45	AE9	A	1015	1022	Right-handed alpha
Helix 46	AF1	B	14	16	Right-handed 310
Helix 47	AF2	B	29	62	Right-handed alpha
Helix 48	AF3	B	95	98	Right-handed 310
Helix 49	AF4	B	99	111	Right-handed alpha
Helix 50	AF5	B	200	204	Right-handed 310
Helix 51	AF6	B	220	224	Right-handed 310
Helix 52	AF7	B	233	237	Right-handed 310
Helix 53	AF8	B	243	245	Right-handed 310
Helix 54	AF9	G	9	13	Right-handed 310
Helix 55	AG1	G	15	40	Right-handed alpha
Helix 56	AG2	C	33	38	Right-handed alpha
Helix 57	AG3	C	47	56	Right-handed alpha
Helix 58	AG4	C	64	76	Right-handed alpha
Helix 59	AG5	C	89	97	Right-handed alpha
Helix 60	AG6	C	99	122	Right-handed alpha
Helix 61	AG7	C	127	160	Right-handed alpha
Helix 62	AG8	C	183	185	Right-handed 310
Helix 63	AG9	C	261	264	Right-handed 310
Helix 64	AH1	C	265	276	Right-handed alpha
Helix 65	AH2	C	282	313	Right-handed alpha
Helix 66	AH3	C	316	331	Right-handed alpha
Helix 67	AH4	C	333	354	Right-handed alpha
Helix 68	AH5	C	361	364	Right-handed 310
Helix 69	AH6	C	365	370	Right-handed alpha
Helix 70	AH7	C	415	428	Right-handed alpha
Helix 71	AH8	C	450	464	Right-handed alpha
Helix 72	AH9	C	466	473	Right-handed alpha
Helix 73	AI1	C	510	516	Right-handed alpha
Helix 74	AI2	C	531	548	Right-handed alpha
Helix 75	AI3	C	598	609	Right-handed alpha
Helix 76	AI4	C	620	632	Right-handed alpha
Helix 77	AI5	C	640	649	Right-handed alpha
Helix 78	AI6	C	656	660	Right-handed 310
Helix 79	AI7	C	667	671	Right-handed alpha
Helix 80	AI8	C	674	685	Right-handed alpha
Helix 81	AI9	C	694	707	Right-handed alpha
Helix 82	AJ1	C	718	720	Right-handed 310
Helix 83	AJ2	C	721	728	Right-handed alpha
Helix 84	AJ3	C	739	746	Right-handed alpha
Helix 85	AJ4	C	756	782	Right-handed alpha
Helix 86	AJ5	C	783	797	Right-handed alpha
Helix 87	AJ6	C	803	812	Right-handed alpha
Helix 88	AJ7	C	815	822	Right-handed alpha
Helix 89	AJ8	C	823	825	Right-handed 310
Helix 90	AJ9	C	846	854	Right-handed alpha
Helix 91	AK1	C	856	876	Right-handed alpha
Helix 92	AK2	C	879	884	Right-handed alpha
Helix 93	AK3	C	886	892	Right-handed alpha
Helix 94	AK4	C	907	939	Right-handed alpha
Helix 95	AK5	C	943	948	Right-handed alpha
Helix 96	AK6	C	951	971	Right-handed alpha
Helix 97	AK7	C	973	978	Right-handed alpha
Helix 98	AK8	C	986	990	Right-handed 310
Helix 99	AK9	C	991	1012	Right-handed alpha
Helix 100	AL1	C	1015	1022	Right-handed alpha
Helix 101	AL2	D	14	16	Right-handed 310
Helix 102	AL3	D	29	62	Right-handed alpha
Helix 103	AL4	D	95	98	Right-handed 310
Helix 104	AL5	D	99	111	Right-handed alpha
Helix 105	AL6	D	200	204	Right-handed 310
Helix 106	AL7	D	220	224	Right-handed 310
Helix 107	AL8	D	233	237	Right-handed 310
Helix 108	AL9	D	243	245	Right-handed 310
Helix 109	AM1	E	9	13	Right-handed 310
Helix 110	AM2	E	15	40	Right-handed alpha

There are 20 sheets in PDB entry 7WYW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	181	first strand
Strand 2	A	168	172	anti-parallel
Strand 3	A	190	194	anti-parallel
Strand 4	A	253	260	anti-parallel
Strand 5	A	202	209	anti-parallel
Strand 6	A	242	243	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	226	first strand
Strand 2	A	212	214	anti-parallel
Strand 3	A	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	356	358	first strand
Strand 2	A	748	750	anti-parallel
Strand 3	A	730	734	parallel
Strand 4	A	712	716	parallel
Strand 5	A	372	375	parallel
Strand 6	A	612	617	parallel
Strand 7	A	687	691	parallel
Strand 8	A	662	666	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	390	392	first strand
Strand 2	A	397	399	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	432	433	first strand
Strand 2	A	447	448	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	476	480	first strand
Strand 2	A	488	494	anti-parallel
Strand 3	A	503	509	anti-parallel
Strand 4	A	551	560	anti-parallel
Strand 5	A	583	591	anti-parallel
Strand 6	A	518	523	parallel
Strand 7	A	526	529	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	898	899	first strand
Strand 2	A	905	906	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	19	first strand
Strand 2	B	24	25	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	80	first strand
Strand 2	B	176	181	anti-parallel
Strand 3	B	261	268	anti-parallel
Strand 4	B	226	232	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	91	first strand
Strand 2	B	296	303	parallel
Strand 3	B	274	280	anti-parallel
Strand 4	B	210	217	anti-parallel
Strand 5	B	239	241	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	177	181	first strand
Strand 2	C	168	172	anti-parallel
Strand 3	C	190	194	anti-parallel
Strand 4	C	253	260	anti-parallel
Strand 5	C	202	209	anti-parallel
Strand 6	C	242	243	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	226	first strand
Strand 2	C	212	214	anti-parallel
Strand 3	C	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	356	358	first strand
Strand 2	C	748	750	anti-parallel
Strand 3	C	730	734	parallel
Strand 4	C	712	716	parallel
Strand 5	C	372	375	parallel
Strand 6	C	612	617	parallel
Strand 7	C	687	691	parallel
Strand 8	C	662	666	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	390	392	first strand
Strand 2	C	397	399	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	432	433	first strand
Strand 2	C	447	448	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	476	480	first strand
Strand 2	C	488	494	anti-parallel
Strand 3	C	503	509	anti-parallel
Strand 4	C	551	560	anti-parallel
Strand 5	C	583	591	anti-parallel
Strand 6	C	518	523	parallel
Strand 7	C	526	529	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	898	899	first strand
Strand 2	C	905	906	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	18	19	first strand
Strand 2	D	24	25	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	78	80	first strand
Strand 2	D	176	181	anti-parallel
Strand 3	D	261	268	anti-parallel
Strand 4	D	226	232	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	91	first strand
Strand 2	D	296	303	parallel
Strand 3	D	274	280	anti-parallel
Strand 4	D	210	217	anti-parallel
Strand 5	D	239	241	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WYW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WYW