Analysis of interatomic Contacts of Structural Units in PDB entry:
7WZ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7WZ7 entry

There are 5 chains in PDB entry 7WZ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 12	LEU 376
B	GLU 3	ASN 340
C	VAL 2	LEU 235
E	THR 6	ARG 62
R	THR 567	SER 854

There are 32 helices in PDB entry 7WZ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	38	Right-handed alpha
Helix 2	AA2	A	49	66	Right-handed alpha
Helix 3	AA3	A	233	238	Right-handed 310
Helix 4	AA4	A	265	278	Right-handed alpha
Helix 5	AA5	A	279	283	Right-handed 310
Helix 6	AA6	A	293	303	Right-handed alpha
Helix 7	AA7	A	319	333	Right-handed alpha
Helix 8	AA8	A	351	375	Right-handed alpha
Helix 9	AA9	B	4	25	Right-handed alpha
Helix 10	AB1	B	29	35	Right-handed alpha
Helix 11	AB2	C	28	32	Right-handed 310
Helix 12	AB3	C	53	56	Right-handed 310
Helix 13	AB4	C	87	91	Right-handed 310
Helix 14	AB5	E	7	24	Right-handed alpha
Helix 15	AB6	E	29	44	Right-handed alpha
Helix 16	AB7	E	45	48	Right-handed 310
Helix 17	AB8	E	55	59	Right-handed 310
Helix 18	AB9	R	568	573	Right-handed 310
Helix 19	AC1	R	578	580	Right-handed 310
Helix 20	AC2	R	581	611	Right-handed alpha
Helix 21	AC3	R	617	646	Right-handed alpha
Helix 22	AC4	R	655	688	Right-handed alpha
Helix 23	AC5	R	694	707	Right-handed alpha
Helix 24	AC6	R	707	722	Right-handed alpha
Helix 25	AC7	R	744	768	Right-handed alpha
Helix 26	AC8	R	785	801	Right-handed alpha
Helix 27	AC9	R	802	805	Right-handed 310
Helix 28	AD1	R	806	813	Right-handed alpha
Helix 29	AD2	R	814	817	Right-handed 310
Helix 30	AD3	R	818	828	Right-handed alpha
Helix 31	AD4	R	829	837	Right-handed alpha
Helix 32	AD5	R	842	854	Right-handed alpha

There are 12 sheets in PDB entry 7WZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	213	first strand
Strand 2	A	218	221	anti-parallel
Strand 3	A	41	46	parallel
Strand 4	A	243	249	parallel
Strand 5	A	286	292	parallel
Strand 6	A	345	346	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	52	first strand
Strand 2	B	335	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	121	125	anti-parallel
Strand 4	B	134	139	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	153	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	175	181	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	192	first strand
Strand 2	B	198	202	anti-parallel
Strand 3	B	207	212	anti-parallel
Strand 4	B	218	223	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	240	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	259	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	304	307	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	7	first strand
Strand 2	C	17	25	anti-parallel
Strand 3	C	78	84	anti-parallel
Strand 4	C	68	73	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	12	first strand
Strand 2	C	115	119	parallel
Strand 3	C	92	99	anti-parallel
Strand 4	C	33	39	anti-parallel
Strand 5	C	45	51	anti-parallel
Strand 6	C	58	60	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	128	130	first strand
Strand 2	C	143	149	anti-parallel
Strand 3	C	199	204	anti-parallel
Strand 4	C	191	196	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	136	first strand
Strand 2	C	231	234	parallel
Strand 3	C	213	219	anti-parallel
Strand 4	C	162	167	anti-parallel
Strand 5	C	174	178	anti-parallel
Strand 6	C	182	183	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7WZ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7WZ7