Analysis of interatomic Contacts of Structural Units in PDB entry:
7WZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WZB entry

There are 2 chains in PDB entry 7WZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 135GLN 389
A
 THR 137GLN 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 7WZB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
135 154Right-handed alpha
Helix 2
AA2
B
156 171Right-handed alpha
Helix 3
AA3
B
174 192Right-handed alpha
Helix 4
AA4
B
195 210Right-handed alpha
Helix 5
AA5
B
213 227Right-handed alpha
Helix 6
AA6
B
229 239Right-handed alpha
Helix 7
AA7
B
239 244Right-handed alpha
Helix 8
AA8
B
245 250Right-handed 310
Helix 9
AA9
B
251 262Right-handed alpha
Helix 10
AB1
B
264 278Right-handed alpha
Helix 11
AB2
B
281 312Right-handed alpha
Helix 12
AB3
B
314 327Right-handed alpha
Helix 13
AB4
B
334 352Right-handed alpha
Helix 14
AB5
A
138 154Right-handed alpha
Helix 15
AB6
A
156 170Right-handed alpha
Helix 16
AB7
A
174 192Right-handed alpha
Helix 17
AB8
A
195 210Right-handed alpha
Helix 18
AB9
A
213 227Right-handed alpha
Helix 19
AC1
A
229 236Right-handed alpha
Helix 20
AC2
A
238 244Right-handed alpha
Helix 21
AC3
A
245 252Right-handed 310
Helix 22
AC4
A
255 260Right-handed alpha
Helix 23
AC5
A
264 278Right-handed alpha
Helix 24
AC6
A
281 296Right-handed alpha
Helix 25
AC7
A
296 312Right-handed alpha
Helix 26
AC8
A
314 320Right-handed alpha
Helix 27
AC9
A
321 326Right-handed alpha
Helix 28
AD1
A
334 352Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7WZB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
363 364first strand
Strand 2
B
355 357anti-parallel
Strand 3
B
380 382anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 364first strand
Strand 2
A
355 357anti-parallel
Strand 3
A
380 382anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il