Analysis of interatomic Contacts of Structural Units in PDB entry:
7WZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7WZM entry

There is 1 chain in PDB entry 7WZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 21SER 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7WZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 43Right-handed alpha
Helix 2
AA2
A
43 56Right-handed alpha
Helix 3
AA3
A
77 86Right-handed alpha
Helix 4
AA4
A
88 90Right-handed 310
Helix 5
AA5
A
96 107Right-handed alpha
Helix 6
AA6
A
114 126Right-handed alpha
Helix 7
AA7
A
127 129Right-handed 310
Helix 8
AA8
A
130 136Right-handed alpha
Helix 9
AA9
A
137 154Right-handed alpha
Helix 10
AB1
A
162 180Right-handed alpha
Helix 11
AB2
A
182 207Right-handed alpha
Helix 12
AB3
A
217 242Right-handed alpha
Helix 13
AB4
A
257 264Right-handed alpha
Helix 14
AB5
A
274 307Right-handed alpha
Helix 15
AB6
A
307 323Right-handed alpha
Helix 16
AB7
A
331 337Right-handed 310
Helix 17
AB8
A
338 352Right-handed alpha
Helix 18
AB9
A
382 387Right-handed alpha
Helix 19
AC1
A
400 404Right-handed 310
Helix 20
AC2
A
405 411Right-handed alpha
Helix 21
AC3
A
413 417Right-handed 310
Helix 22
AC4
A
422 426Right-handed 310
Helix 23
AC5
A
429 447Right-handed alpha
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There are 4 sheets in PDB entry 7WZM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
72 75anti-parallel
Strand 3
A
378 381parallel
Strand 4
A
358 362anti-parallel
Strand 5
A
92 93anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
473 478anti-parallel
Strand 3
A
448 452anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 368first strand
Strand 2
A
371 373anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 462first strand
Strand 2
A
466 468anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il