Analysis of interatomic Contacts of Structural Units in PDB entry:
7X07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X07 entry

There are 2 chains in PDB entry 7X07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 66GLY 721
B
 MET 67GLU 722
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 7X07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 83Right-handed alpha
Helix 2
AA2
A
89 96Right-handed alpha
Helix 3
AA3
A
101 106Right-handed alpha
Helix 4
AA4
A
106 111Right-handed alpha
Helix 5
AA5
A
115 124Right-handed alpha
Helix 6
AA6
A
127 140Right-handed alpha
Helix 7
AA7
A
140 168Right-handed alpha
Helix 8
AA8
A
170 175Right-handed alpha
Helix 9
AA9
A
178 186Right-handed alpha
Helix 10
AB1
A
192 198Right-handed alpha
Helix 11
AB2
A
201 206Right-handed alpha
Helix 12
AB3
A
217 232Right-handed alpha
Helix 13
AB4
A
241 246Right-handed alpha
Helix 14
AB5
A
261 269Right-handed alpha
Helix 15
AB6
A
291 296Right-handed alpha
Helix 16
AB7
A
302 306Right-handed 310
Helix 17
AB8
A
339 347Right-handed alpha
Helix 18
AB9
A
347 353Right-handed alpha
Helix 19
AC1
A
362 371Right-handed alpha
Helix 20
AC2
A
379 394Right-handed alpha
Helix 21
AC3
A
396 404Right-handed alpha
Helix 22
AC4
A
408 431Right-handed alpha
Helix 23
AC5
A
508 511Right-handed 310
Helix 24
AC6
A
512 521Right-handed alpha
Helix 25
AC7
A
552 557Right-handed alpha
Helix 26
AC8
A
574 583Right-handed alpha
Helix 27
AC9
A
585 591Right-handed 310
Helix 28
AD1
A
606 608Right-handed 310
Helix 29
AD2
A
609 621Right-handed alpha
Helix 30
AD3
A
639 650Right-handed alpha
Helix 31
AD4
A
660 667Right-handed 310
Helix 32
AD5
A
690 701Right-handed alpha
Helix 33
AD6
A
708 718Right-handed alpha
Helix 34
AD7
A
719 721Right-handed 310
Helix 35
AD8
B
68 83Right-handed alpha
Helix 36
AD9
B
88 92Right-handed 310
Helix 37
AE1
B
118 123Right-handed alpha
Helix 38
AE2
B
127 139Right-handed alpha
Helix 39
AE3
B
141 146Right-handed alpha
Helix 40
AE4
B
155 160Right-handed alpha
Helix 41
AE5
B
181 186Right-handed alpha
Helix 42
AE6
B
192 199Right-handed alpha
Helix 43
AE7
B
200 206Right-handed alpha
Helix 44
AE8
B
220 225Right-handed alpha
Helix 45
AE9
B
227 237Right-handed alpha
Helix 46
AF1
B
250 255Right-handed alpha
Helix 47
AF2
B
267 289Right-handed alpha
Helix 48
AF3
B
289 297Right-handed alpha
Helix 49
AF4
B
300 312Right-handed alpha
Helix 50
AF5
B
318 323Right-handed alpha
Helix 51
AF6
B
327 337Right-handed alpha
Helix 52
AF7
B
339 353Right-handed alpha
Helix 53
AF8
B
362 371Right-handed alpha
Helix 54
AF9
B
373 378Right-handed 310
Helix 55
AG1
B
382 391Right-handed alpha
Helix 56
AG2
B
407 426Right-handed alpha
Helix 57
AG3
B
428 432Right-handed 310
Helix 58
AG4
B
512 522Right-handed alpha
Helix 59
AG5
B
552 556Right-handed 310
Helix 60
AG6
B
564 568Right-handed 310
Helix 61
AG7
B
572 574Right-handed 310
Helix 62
AG8
B
575 583Right-handed alpha
Helix 63
AG9
B
608 621Right-handed alpha
Helix 64
AH1
B
640 649Right-handed alpha
Helix 65
AH2
B
661 665Right-handed 310
Helix 66
AH3
B
686 706Right-handed alpha
Helix 67
AH4
B
709 721Right-handed alpha
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There are 4 sheets in PDB entry 7X07. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
530 533parallel
Strand 3
A
474 482anti-parallel
Strand 4
A
488 497anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 469first strand
Strand 2
B
531 533parallel
Strand 3
B
475 476anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
539 543first strand
Strand 2
B
625 629parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
670 671first strand
Strand 2
B
681 682anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il