Analysis of interatomic Contacts of Structural Units in PDB entry:
7X0E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X0E entry

There is 1 chain in PDB entry 7X0E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 822ALA 1233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7X0E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
825 838Right-handed alpha
Helix 2
AA2
A
856 871Right-handed alpha
Helix 3
AA3
A
872 874Right-handed 310
Helix 4
AA4
A
891 895Right-handed 310
Helix 5
AA5
A
904 922Right-handed alpha
Helix 6
AA6
A
954 956Right-handed 310
Helix 7
AA7
A
957 973Right-handed alpha
Helix 8
AA8
A
983 997Right-handed alpha
Helix 9
AA9
A
998 1012Right-handed alpha
Helix 10
AB1
A
1013 1015Right-handed 310
Helix 11
AB2
A
1041 1054Right-handed alpha
Helix 12
AB3
A
1058 1076Right-handed alpha
Helix 13
AB4
A
1091 1095Right-handed 310
Helix 14
AB5
A
1116 1134Right-handed alpha
Helix 15
AB6
A
1138 1149Right-handed alpha
Helix 16
AB7
A
1214 1233Right-handed alpha
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There are 3 sheets in PDB entry 7X0E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
897 902first strand
Strand 2
A
932 939parallel
Strand 3
A
944 952anti-parallel
Strand 4
A
845 853anti-parallel
Strand 5
A
1176 1182anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
876 879first strand
Strand 2
A
886 889anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1033 1039first strand
Strand 2
A
1203 1209anti-parallel
Strand 3
A
1191 1196anti-parallel
Strand 4
A
1158 1163parallel
Strand 5
A
1079 1086parallel
Strand 6
A
1103 1110anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il