Analysis of interatomic Contacts of Structural Units in PDB entry:
7X0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X0M entry

There are 2 chains in PDB entry 7X0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 49LEU 454
B
 SER 49GLU 456
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7X0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
62 78Right-handed alpha
Helix 2
AA2
A
89 104Right-handed alpha
Helix 3
AA3
A
116 122Right-handed alpha
Helix 4
AA4
A
135 139Right-handed 310
Helix 5
AA5
A
140 148Right-handed 310
Helix 6
AA6
A
171 178Right-handed alpha
Helix 7
AA7
A
187 199Right-handed alpha
Helix 8
AA8
A
219 232Right-handed alpha
Helix 9
AA9
A
248 264Right-handed alpha
Helix 10
AB1
A
268 274Right-handed 310
Helix 11
AB2
A
275 285Right-handed alpha
Helix 12
AB3
A
296 309Right-handed alpha
Helix 13
AB4
A
311 314Right-handed 310
Helix 14
AB5
A
345 357Right-handed alpha
Helix 15
AB6
A
358 370Right-handed alpha
Helix 16
AB7
A
375 385Right-handed 310
Helix 17
AB8
A
386 399Right-handed alpha
Helix 18
AB9
A
408 428Right-handed alpha
Helix 19
AC1
A
435 454Right-handed alpha
Helix 20
AC2
B
62 78Right-handed alpha
Helix 21
AC3
B
89 104Right-handed alpha
Helix 22
AC4
B
116 122Right-handed alpha
Helix 23
AC5
B
135 139Right-handed 310
Helix 24
AC6
B
140 148Right-handed 310
Helix 25
AC7
B
171 178Right-handed alpha
Helix 26
AC8
B
187 199Right-handed alpha
Helix 27
AC9
B
219 233Right-handed alpha
Helix 28
AD1
B
248 264Right-handed alpha
Helix 29
AD2
B
269 274Right-handed 310
Helix 30
AD3
B
275 285Right-handed alpha
Helix 31
AD4
B
296 309Right-handed alpha
Helix 32
AD5
B
310 314Right-handed 310
Helix 33
AD6
B
345 357Right-handed alpha
Helix 34
AD7
B
358 370Right-handed alpha
Helix 35
AD8
B
375 386Right-handed 310
Helix 36
AD9
B
388 399Right-handed alpha
Helix 37
AE1
B
408 429Right-handed alpha
Helix 38
AE2
B
435 456Right-handed alpha
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There are 8 sheets in PDB entry 7X0M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 87first strand
Strand 2
A
50 56parallel
Strand 3
A
109 113parallel
Strand 4
A
333 339anti-parallel
Strand 5
A
158 163anti-parallel
Strand 6
A
372 373anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 211first strand
Strand 2
A
288 293parallel
Strand 3
A
166 170anti-parallel
Strand 4
A
316 319anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
206 207anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 331first strand
Strand 2
A
400 401parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 87first strand
Strand 2
B
50 56parallel
Strand 3
B
109 113parallel
Strand 4
B
333 339anti-parallel
Strand 5
B
158 163anti-parallel
Strand 6
B
372 373anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
209 211first strand
Strand 2
B
288 293parallel
Strand 3
B
166 170anti-parallel
Strand 4
B
316 319anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
206 207anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 331first strand
Strand 2
B
400 401parallel
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