Analysis of interatomic Contacts of Structural Units in PDB entry:
7X0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X0Q entry

There are 2 chains in PDB entry 7X0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3MET 369
B
 SER 3MET 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7X0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 51Right-handed alpha
Helix 2
AA2
A
72 76Right-handed 310
Helix 3
AA3
A
92 98Right-handed alpha
Helix 4
AA4
A
107 123Right-handed alpha
Helix 5
AA5
A
124 128Right-handed 310
Helix 6
AA6
A
131 135Right-handed 310
Helix 7
AA7
A
136 150Right-handed alpha
Helix 8
AA8
A
166 185Right-handed alpha
Helix 9
AA9
A
218 225Right-handed alpha
Helix 10
AB1
A
228 235Right-handed alpha
Helix 11
AB2
A
288 290Right-handed 310
Helix 12
AB3
A
295 302Right-handed alpha
Helix 13
AB4
A
354 357Right-handed 310
Helix 14
AB5
B
42 51Right-handed alpha
Helix 15
AB6
B
72 76Right-handed 310
Helix 16
AB7
B
92 98Right-handed alpha
Helix 17
AB8
B
111 119Right-handed alpha
Helix 18
AB9
B
120 123Right-handed 310
Helix 19
AC1
B
124 128Right-handed 310
Helix 20
AC2
B
137 150Right-handed alpha
Helix 21
AC3
B
166 185Right-handed alpha
Helix 22
AC4
B
197 202Right-handed alpha
Helix 23
AC5
B
218 225Right-handed alpha
Helix 24
AC6
B
228 235Right-handed alpha
Helix 25
AC7
B
288 290Right-handed 310
Helix 26
AC8
B
295 302Right-handed alpha
Helix 27
AC9
B
354 357Right-handed 310
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There are 8 sheets in PDB entry 7X0Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 27first strand
Strand 2
A
4 12anti-parallel
Strand 3
A
58 63anti-parallel
Strand 4
A
66 67anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
155 159parallel
Strand 3
A
187 191parallel
Strand 4
A
32 36parallel
Strand 5
A
204 209parallel
Strand 6
A
212 217anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 265first strand
Strand 2
A
253 258anti-parallel
Strand 3
A
241 250anti-parallel
Strand 4
A
282 287anti-parallel
Strand 5
A
358 361anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 293first strand
Strand 2
A
347 352anti-parallel
Strand 3
A
306 316anti-parallel
Strand 4
A
321 326anti-parallel
Strand 5
A
331 336anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 27first strand
Strand 2
B
4 12anti-parallel
Strand 3
B
58 63anti-parallel
Strand 4
B
66 67anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 81first strand
Strand 2
B
155 159parallel
Strand 3
B
187 191parallel
Strand 4
B
32 36parallel
Strand 5
B
204 209parallel
Strand 6
B
212 217anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 265first strand
Strand 2
B
253 258anti-parallel
Strand 3
B
241 250anti-parallel
Strand 4
B
282 287anti-parallel
Strand 5
B
358 360anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
292 293first strand
Strand 2
B
347 352anti-parallel
Strand 3
B
306 316anti-parallel
Strand 4
B
321 326anti-parallel
Strand 5
B
331 336anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il