Analysis of interatomic Contacts of Structural Units in PDB entry:
7X0R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X0R entry

There are 2 chains in PDB entry 7X0R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 45ASP 355
B
 GLY 43ASP 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7X0R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 78Right-handed alpha
Helix 2
AA2
A
88 90Right-handed 310
Helix 3
AA3
A
91 102Right-handed alpha
Helix 4
AA4
A
114 125Right-handed alpha
Helix 5
AA5
A
149 165Right-handed alpha
Helix 6
AA6
A
178 196Right-handed alpha
Helix 7
AA7
A
211 225Right-handed alpha
Helix 8
AA8
A
236 249Right-handed alpha
Helix 9
AA9
A
259 263Right-handed 310
Helix 10
AB1
A
274 289Right-handed alpha
Helix 11
AB2
A
315 331Right-handed alpha
Helix 12
AB3
A
339 348Right-handed alpha
Helix 13
AB4
B
61 78Right-handed alpha
Helix 14
AB5
B
88 90Right-handed 310
Helix 15
AB6
B
91 102Right-handed alpha
Helix 16
AB7
B
114 125Right-handed alpha
Helix 17
AB8
B
149 165Right-handed alpha
Helix 18
AB9
B
178 196Right-handed alpha
Helix 19
AC1
B
211 225Right-handed alpha
Helix 20
AC2
B
236 249Right-handed alpha
Helix 21
AC3
B
259 263Right-handed 310
Helix 22
AC4
B
274 289Right-handed alpha
Helix 23
AC5
B
315 331Right-handed alpha
Helix 24
AC6
B
339 348Right-handed alpha
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There are 4 sheets in PDB entry 7X0R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 85first strand
Strand 2
A
47 52parallel
Strand 3
A
106 110parallel
Strand 4
A
129 133parallel
Strand 5
A
143 148parallel
Strand 6
A
294 298parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 205first strand
Strand 2
A
169 174parallel
Strand 3
A
229 233parallel
Strand 4
A
251 256parallel
Strand 5
A
267 273parallel
Strand 6
A
305 307anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 85first strand
Strand 2
B
47 52parallel
Strand 3
B
106 110parallel
Strand 4
B
129 133parallel
Strand 5
B
143 148parallel
Strand 6
B
294 298parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 205first strand
Strand 2
B
169 174parallel
Strand 3
B
229 233parallel
Strand 4
B
251 256parallel
Strand 5
B
267 273parallel
Strand 6
B
305 307anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il