Analysis of interatomic Contacts of Structural Units in PDB entry:
7X10

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7X10 entry

There are 5 chains in PDB entry 7X10 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 13	LEU 376
B	GLU 3	ASN 340
E	VAL 2	LEU 249
G	THR 6	ARG 62
R	THR 923	THR 1208

There are 31 helices in PDB entry 7X10. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	17	39	Right-handed alpha
Helix 2	AA2	A	49	66	Right-handed alpha
Helix 3	AA3	A	230	235	Right-handed alpha
Helix 4	AA4	A	236	238	Right-handed 310
Helix 5	AA5	A	265	278	Right-handed alpha
Helix 6	AA6	A	279	283	Right-handed 310
Helix 7	AA7	A	293	303	Right-handed alpha
Helix 8	AA8	A	319	322	Right-handed 310
Helix 9	AA9	A	323	333	Right-handed alpha
Helix 10	AB1	A	350	371	Right-handed alpha
Helix 11	AB2	B	4	24	Right-handed alpha
Helix 12	AB3	B	29	37	Right-handed 310
Helix 13	AB4	E	28	32	Right-handed 310
Helix 14	AB5	E	87	91	Right-handed 310
Helix 15	AB6	G	7	24	Right-handed alpha
Helix 16	AB7	G	29	44	Right-handed alpha
Helix 17	AB8	R	925	930	Right-handed 310
Helix 18	AB9	R	940	956	Right-handed alpha
Helix 19	AC1	R	958	967	Right-handed alpha
Helix 20	AC2	R	970	974	Right-handed 310
Helix 21	AC3	R	975	998	Right-handed alpha
Helix 22	AC4	R	1010	1038	Right-handed alpha
Helix 23	AC5	R	1047	1070	Right-handed alpha
Helix 24	AC6	R	1086	1091	Right-handed 310
Helix 25	AC7	R	1092	1117	Right-handed alpha
Helix 26	AC8	R	1144	1154	Right-handed alpha
Helix 27	AC9	R	1159	1164	Right-handed 310
Helix 28	AD1	R	1166	1168	Right-handed 310
Helix 29	AD2	R	1169	1181	Right-handed alpha
Helix 30	AD3	R	1182	1191	Right-handed alpha
Helix 31	AD4	R	1195	1204	Right-handed alpha

There are 12 sheets in PDB entry 7X10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	213	first strand
Strand 2	A	218	221	anti-parallel
Strand 3	A	41	47	parallel
Strand 4	A	243	249	parallel
Strand 5	A	286	292	parallel
Strand 6	A	343	346	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	51	first strand
Strand 2	B	336	339	anti-parallel
Strand 3	B	327	331	anti-parallel
Strand 4	B	315	320	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	63	first strand
Strand 2	B	69	74	anti-parallel
Strand 3	B	78	83	anti-parallel
Strand 4	B	88	94	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	100	105	first strand
Strand 2	B	111	116	anti-parallel
Strand 3	B	120	125	anti-parallel
Strand 4	B	134	140	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	149	first strand
Strand 2	B	156	161	anti-parallel
Strand 3	B	165	170	anti-parallel
Strand 4	B	175	181	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	192	first strand
Strand 2	B	198	202	anti-parallel
Strand 3	B	207	212	anti-parallel
Strand 4	B	218	223	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	234	first strand
Strand 2	B	241	245	anti-parallel
Strand 3	B	250	254	anti-parallel
Strand 4	B	259	264	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	273	278	first strand
Strand 2	B	284	289	anti-parallel
Strand 3	B	294	298	anti-parallel
Strand 4	B	304	307	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	7	first strand
Strand 2	E	15	25	anti-parallel
Strand 3	E	78	86	anti-parallel
Strand 4	E	68	73	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	12	first strand
Strand 2	E	115	119	parallel
Strand 3	E	92	99	anti-parallel
Strand 4	E	33	39	anti-parallel
Strand 5	E	45	51	anti-parallel
Strand 6	E	58	60	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	143	144	first strand
Strand 2	E	157	162	anti-parallel
Strand 3	E	213	218	anti-parallel
Strand 4	E	205	210	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	150	first strand
Strand 2	E	245	248	parallel
Strand 3	E	228	232	anti-parallel
Strand 4	E	177	181	anti-parallel
Strand 5	E	188	192	anti-parallel
Strand 6	E	196	197	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7X10

Analysis of interatomic Contacts of Structural Units in PDB entry:
7X10