Analysis of interatomic Contacts of Structural Units in PDB entry:
7X1I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X1I entry

There are 2 chains in PDB entry 7X1I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 104ALA 887
B
 GLY 104ALA 887
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 7X1I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 136Right-handed alpha
Helix 2
AA2
A
147 160Right-handed alpha
Helix 3
AA3
A
173 180Right-handed alpha
Helix 4
AA4
A
264 277Right-handed alpha
Helix 5
AA5
A
278 288Right-handed alpha
Helix 6
AA6
A
290 307Right-handed alpha
Helix 7
AA7
A
343 354Right-handed alpha
Helix 8
AA8
A
356 362Right-handed alpha
Helix 9
AA9
A
371 401Right-handed alpha
Helix 10
AB1
A
406 425Right-handed alpha
Helix 11
AB2
A
435 452Right-handed alpha
Helix 12
AB3
A
455 477Right-handed alpha
Helix 13
AB4
A
478 486Right-handed 310
Helix 14
AB5
A
487 517Right-handed alpha
Helix 15
AB6
A
571 594Right-handed alpha
Helix 16
AB7
A
595 597Right-handed 310
Helix 17
AB8
A
601 611Right-handed alpha
Helix 18
AB9
A
611 626Right-handed alpha
Helix 19
AC1
A
649 653Right-handed 310
Helix 20
AC2
A
657 684Right-handed alpha
Helix 21
AC3
A
695 713Right-handed alpha
Helix 22
AC4
A
723 732Right-handed alpha
Helix 23
AC5
A
755 768Right-handed alpha
Helix 24
AC6
A
772 779Right-handed alpha
Helix 25
AC7
A
780 795Right-handed alpha
Helix 26
AC8
A
799 809Right-handed alpha
Helix 27
AC9
A
811 815Right-handed 310
Helix 28
AD1
A
818 824Right-handed alpha
Helix 29
AD2
A
825 848Right-handed alpha
Helix 30
AD3
A
851 857Right-handed alpha
Helix 31
AD4
A
857 871Right-handed alpha
Helix 32
AD5
A
871 877Right-handed alpha
Helix 33
AD6
A
878 887Right-handed alpha
Helix 34
AD7
B
123 136Right-handed alpha
Helix 35
AD8
B
147 160Right-handed alpha
Helix 36
AD9
B
173 180Right-handed alpha
Helix 37
AE1
B
264 277Right-handed alpha
Helix 38
AE2
B
278 288Right-handed alpha
Helix 39
AE3
B
290 307Right-handed alpha
Helix 40
AE4
B
343 354Right-handed alpha
Helix 41
AE5
B
356 362Right-handed alpha
Helix 42
AE6
B
371 401Right-handed alpha
Helix 43
AE7
B
406 425Right-handed alpha
Helix 44
AE8
B
435 452Right-handed alpha
Helix 45
AE9
B
455 477Right-handed alpha
Helix 46
AF1
B
478 486Right-handed 310
Helix 47
AF2
B
487 517Right-handed alpha
Helix 48
AF3
B
571 594Right-handed alpha
Helix 49
AF4
B
595 597Right-handed 310
Helix 50
AF5
B
601 611Right-handed alpha
Helix 51
AF6
B
611 626Right-handed alpha
Helix 52
AF7
B
649 653Right-handed 310
Helix 53
AF8
B
657 684Right-handed alpha
Helix 54
AF9
B
695 713Right-handed alpha
Helix 55
AG1
B
723 732Right-handed alpha
Helix 56
AG2
B
755 768Right-handed alpha
Helix 57
AG3
B
772 779Right-handed alpha
Helix 58
AG4
B
780 795Right-handed alpha
Helix 59
AG5
B
799 809Right-handed alpha
Helix 60
AG6
B
811 815Right-handed 310
Helix 61
AG7
B
818 824Right-handed alpha
Helix 62
AG8
B
825 848Right-handed alpha
Helix 63
AG9
B
851 857Right-handed alpha
Helix 64
AH1
B
857 871Right-handed alpha
Helix 65
AH2
B
871 877Right-handed alpha
Helix 66
AH3
B
878 887Right-handed alpha
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There are 6 sheets in PDB entry 7X1I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 143first strand
Strand 2
A
228 238parallel
Strand 3
A
247 255anti-parallel
Strand 4
A
214 220parallel
Strand 5
A
196 202anti-parallel
Strand 6
B
105 115anti-parallel
Strand 7
A
105 115anti-parallel
Strand 8
B
196 202anti-parallel
Strand 9
B
214 220anti-parallel
Strand 10
B
247 255parallel
Strand 11
B
228 238anti-parallel
Strand 12
B
139 143parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 210first strand
Strand 2
A
196 202anti-parallel
Strand 3
B
105 115anti-parallel
Strand 4
A
105 115anti-parallel
Strand 5
B
196 202anti-parallel
Strand 6
B
209 210anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
432 433first strand
Strand 2
A
719 720anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
733 735first strand
Strand 2
A
748 751anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
432 433first strand
Strand 2
B
719 720anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
733 735first strand
Strand 2
B
748 751anti-parallel
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