Analysis of interatomic Contacts of Structural Units in PDB entry:
7X1W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X1W entry

There are 2 chains in PDB entry 7X1W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 64GLU 682
B
 LYS 64GLU 682
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7X1W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 83Right-handed alpha
Helix 2
AA2
A
88 124Right-handed alpha
Helix 3
AA3
A
126 140Right-handed alpha
Helix 4
AA4
A
140 175Right-handed alpha
Helix 5
AA5
A
178 186Right-handed alpha
Helix 6
AA6
A
192 236Right-handed alpha
Helix 7
AA7
A
241 254Right-handed alpha
Helix 8
AA8
A
255 256Right-handed 310
Helix 9
AA9
A
257 262Right-handed 310
Helix 10
AB1
A
263 289Right-handed alpha
Helix 11
AB2
A
289 296Right-handed alpha
Helix 12
AB3
A
298 324Right-handed alpha
Helix 13
AB4
A
326 337Right-handed alpha
Helix 14
AB5
A
338 353Right-handed alpha
Helix 15
AB6
A
373 431Right-handed alpha
Helix 16
AB7
A
514 521Right-handed alpha
Helix 17
AB8
A
552 556Right-handed 310
Helix 18
AB9
A
574 583Right-handed alpha
Helix 19
AC1
A
585 590Right-handed alpha
Helix 20
AC2
A
606 622Right-handed alpha
Helix 21
AC3
A
636 651Right-handed alpha
Helix 22
AC4
A
660 667Right-handed 310
Helix 23
AC5
B
68 83Right-handed alpha
Helix 24
AC6
B
88 124Right-handed alpha
Helix 25
AC7
B
126 140Right-handed alpha
Helix 26
AC8
B
140 175Right-handed alpha
Helix 27
AC9
B
178 186Right-handed alpha
Helix 28
AD1
B
192 197Right-handed alpha
Helix 29
AD2
B
198 226Right-handed alpha
Helix 30
AD3
B
226 236Right-handed alpha
Helix 31
AD4
B
241 260Right-handed alpha
Helix 32
AD5
B
263 289Right-handed alpha
Helix 33
AD6
B
289 297Right-handed alpha
Helix 34
AD7
B
298 337Right-handed alpha
Helix 35
AD8
B
338 354Right-handed alpha
Helix 36
AD9
B
373 431Right-handed alpha
Helix 37
AE1
B
514 521Right-handed alpha
Helix 38
AE2
B
572 583Right-handed alpha
Helix 39
AE3
B
585 590Right-handed alpha
Helix 40
AE4
B
606 622Right-handed alpha
Helix 41
AE5
B
636 651Right-handed alpha
Helix 42
AE6
B
660 667Right-handed 310
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There are 6 sheets in PDB entry 7X1W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 469first strand
Strand 2
A
530 533parallel
Strand 3
A
474 477anti-parallel
Strand 4
A
494 497anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
481 482first strand
Strand 2
A
488 490anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 542first strand
Strand 2
A
627 628parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
466 469first strand
Strand 2
B
530 533parallel
Strand 3
B
474 477anti-parallel
Strand 4
B
496 497anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
481 482first strand
Strand 2
B
488 490anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
539 540first strand
Strand 2
B
625 626parallel
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