Analysis of interatomic Contacts of Structural Units in PDB entry:
7X3V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7X3V entry

There are 10 chains in PDB entry 7X3V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 37	ARG 134
B	LYS 20	GLY 101
C	ALA 12	LYS 118
D	SER 29	ALA 121
E	ARG 40	ARG 134
F	ARG 17	GLY 102
G	ALA 12	LYS 118
H	SER 29	ALA 121
I	T 2	A 147
J	T 1	T 51

There are 62 helices in PDB entry 7X3V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	57	Right-handed alpha
Helix 2	AA2	A	63	76	Right-handed alpha
Helix 3	AA3	A	85	114	Right-handed alpha
Helix 4	AA4	A	120	132	Right-handed alpha
Helix 5	AA5	B	25	29	Right-handed 310
Helix 6	AA6	B	30	41	Right-handed alpha
Helix 7	AA7	B	49	76	Right-handed alpha
Helix 8	AA8	B	82	93	Right-handed alpha
Helix 9	AA9	C	16	21	Right-handed alpha
Helix 10	AB1	C	26	37	Right-handed alpha
Helix 11	AB2	C	45	73	Right-handed alpha
Helix 12	AB3	C	79	89	Right-handed alpha
Helix 13	AB4	C	90	97	Right-handed alpha
Helix 14	AB5	C	112	116	Right-handed 310
Helix 15	AB6	D	34	46	Right-handed alpha
Helix 16	AB7	D	52	81	Right-handed alpha
Helix 17	AB8	D	87	99	Right-handed alpha
Helix 18	AB9	D	101	121	Right-handed alpha
Helix 19	AC1	E	44	57	Right-handed alpha
Helix 20	AC2	E	63	76	Right-handed alpha
Helix 21	AC3	E	85	114	Right-handed alpha
Helix 22	AC4	E	120	131	Right-handed alpha
Helix 23	AC5	F	25	29	Right-handed 310
Helix 24	AC6	F	30	41	Right-handed alpha
Helix 25	AC7	F	49	76	Right-handed alpha
Helix 26	AC8	F	82	93	Right-handed alpha
Helix 27	AC9	G	16	21	Right-handed alpha
Helix 28	AD1	G	26	37	Right-handed alpha
Helix 29	AD2	G	45	72	Right-handed alpha
Helix 30	AD3	G	79	89	Right-handed alpha
Helix 31	AD4	G	90	97	Right-handed alpha
Helix 32	AD5	G	112	116	Right-handed 310
Helix 33	AD6	H	34	46	Right-handed alpha
Helix 34	AD7	H	52	81	Right-handed alpha
Helix 35	AD8	H	87	99	Right-handed alpha
Helix 36	AD9	H	101	121	Right-handed alpha
Helix 37	AE1	U	178	192	Right-handed alpha
Helix 38	AE2	U	193	196	Right-handed 310
Helix 39	AE3	U	197	202	Right-handed alpha
Helix 40	AE4	U	204	213	Right-handed alpha
Helix 41	AE5	U	237	241	Right-handed 310
Helix 42	AE6	U	243	267	Right-handed alpha
Helix 43	AE7	U	283	288	Right-handed alpha
Helix 44	AE8	U	295	310	Right-handed alpha
Helix 45	AE9	U	312	316	Right-handed 310
Helix 46	AF1	U	368	376	Right-handed 310
Helix 47	AF2	U	384	403	Right-handed alpha
Helix 48	AF3	U	403	415	Right-handed alpha
Helix 49	AF4	U	430	435	Right-handed alpha
Helix 50	AF5	U	436	460	Right-handed alpha
Helix 51	AF6	U	461	469	Right-handed alpha
Helix 52	AF7	U	474	492	Right-handed alpha
Helix 53	AF8	U	494	510	Right-handed alpha
Helix 54	AF9	U	524	528	Right-handed 310
Helix 55	AG1	U	568	581	Right-handed alpha
Helix 56	AG2	U	585	592	Right-handed alpha
Helix 57	AG3	U	607	618	Right-handed alpha
Helix 58	AG4	U	633	649	Right-handed alpha
Helix 59	AG5	U	651	656	Right-handed 310
Helix 60	AG6	U	681	686	Right-handed alpha
Helix 61	AG7	U	695	727	Right-handed alpha
Helix 62	AG8	U	732	743	Right-handed alpha

There are 11 sheets in PDB entry 7X3V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	83	84	first strand
Strand 2	B	80	81	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	118	119	first strand
Strand 2	B	45	46	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	97	98	first strand
Strand 2	G	101	102	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	D	85	86	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	D	50	51	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	102	first strand
Strand 2	F	96	98	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	83	84	first strand
Strand 2	F	80	81	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	118	119	first strand
Strand 2	F	45	46	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	42	43	first strand
Strand 2	H	85	86	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	78	first strand
Strand 2	H	50	51	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	174	175	first strand
Strand 2	U	627	631	anti-parallel
Strand 3	U	603	606	anti-parallel
Strand 4	U	547	550	anti-parallel
Strand 5	U	539	543	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7X3V

Analysis of interatomic Contacts of Structural Units in PDB entry:
7X3V