Analysis of interatomic Contacts of Structural Units in PDB entry:
7X4Y

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7X4Y entry

There are 3 chains in PDB entry 7X4Y (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 2	GLU 459
B	GLU 2	GLU 459
C	GLU 2	TYR 337

There are113 helices in PDB entry 7X4Y. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	23	Right-handed 310
Helix 2	AA2	A	36	48	Right-handed alpha
Helix 3	AA3	A	53	57	Right-handed 310
Helix 4	AA4	A	67	77	Right-handed alpha
Helix 5	AA5	A	88	106	Right-handed alpha
Helix 6	AA6	A	122	146	Right-handed alpha
Helix 7	AA7	A	162	172	Right-handed alpha
Helix 8	AA8	A	188	195	Right-handed alpha
Helix 9	AA9	A	217	233	Right-handed alpha
Helix 10	AB1	A	244	247	Right-handed 310
Helix 11	AB2	A	248	253	Right-handed alpha
Helix 12	AB3	A	289	293	Right-handed 310
Helix 13	AB4	A	294	298	Right-handed 310
Helix 14	AB5	A	319	357	Right-handed alpha
Helix 15	AB6	A	378	385	Right-handed alpha
Helix 16	AB7	A	388	398	Right-handed alpha
Helix 17	AB8	A	427	446	Right-handed alpha
Helix 18	AB9	A	452	459	Right-handed alpha
Helix 19	AC1	B	5	9	Right-handed 310
Helix 20	AC2	B	14	18	Right-handed 310
Helix 21	AC3	B	19	23	Right-handed 310
Helix 22	AC4	B	36	48	Right-handed alpha
Helix 23	AC5	B	53	57	Right-handed 310
Helix 24	AC6	B	67	77	Right-handed alpha
Helix 25	AC7	B	88	106	Right-handed alpha
Helix 26	AC8	B	122	145	Right-handed alpha
Helix 27	AC9	B	162	172	Right-handed alpha
Helix 28	AD1	B	188	195	Right-handed alpha
Helix 29	AD2	B	217	233	Right-handed alpha
Helix 30	AD3	B	244	247	Right-handed 310
Helix 31	AD4	B	248	253	Right-handed alpha
Helix 32	AD5	B	289	293	Right-handed 310
Helix 33	AD6	B	319	358	Right-handed alpha
Helix 34	AD7	B	378	385	Right-handed alpha
Helix 35	AD8	B	388	398	Right-handed alpha
Helix 36	AD9	B	427	446	Right-handed alpha
Helix 37	AE1	B	452	459	Right-handed alpha
Helix 38	AE2	C	5	9	Right-handed 310
Helix 39	AE3	C	14	23	Right-handed 310
Helix 40	AE4	C	36	48	Right-handed alpha
Helix 41	AE5	C	53	57	Right-handed 310
Helix 42	AE6	C	67	77	Right-handed alpha
Helix 43	AE7	C	88	106	Right-handed alpha
Helix 44	AE8	C	122	146	Right-handed alpha
Helix 45	AE9	C	162	172	Right-handed alpha
Helix 46	AF1	C	188	195	Right-handed alpha
Helix 47	AF2	C	217	233	Right-handed alpha
Helix 48	AF3	C	244	247	Right-handed 310
Helix 49	AF4	C	248	253	Right-handed alpha
Helix 50	AF5	C	289	293	Right-handed 310
Helix 51	AF6	C	319	357	Right-handed alpha
Helix 52	AF7	C	378	385	Right-handed alpha
Helix 53	AF8	C	388	398	Right-handed alpha
Helix 54	AF9	C	427	446	Right-handed alpha
Helix 55	AG1	C	452	459	Right-handed alpha
Helix 56	AG2	D	5	9	Right-handed 310
Helix 57	AG3	D	14	18	Right-handed 310
Helix 58	AG4	D	19	23	Right-handed 310
Helix 59	AG5	D	36	48	Right-handed alpha
Helix 60	AG6	D	53	57	Right-handed 310
Helix 61	AG7	D	67	77	Right-handed alpha
Helix 62	AG8	D	88	106	Right-handed alpha
Helix 63	AG9	D	122	146	Right-handed alpha
Helix 64	AH1	D	162	171	Right-handed alpha
Helix 65	AH2	D	188	195	Right-handed alpha
Helix 66	AH3	D	217	233	Right-handed alpha
Helix 67	AH4	D	244	247	Right-handed 310
Helix 68	AH5	D	248	253	Right-handed alpha
Helix 69	AH6	D	289	293	Right-handed 310
Helix 70	AH7	D	294	298	Right-handed 310
Helix 71	AH8	D	319	358	Right-handed alpha
Helix 72	AH9	D	378	385	Right-handed alpha
Helix 73	AI1	D	388	398	Right-handed alpha
Helix 74	AI2	D	427	446	Right-handed alpha
Helix 75	AI3	D	452	459	Right-handed alpha
Helix 76	AI4	E	5	9	Right-handed 310
Helix 77	AI5	E	14	18	Right-handed 310
Helix 78	AI6	E	19	23	Right-handed 310
Helix 79	AI7	E	36	48	Right-handed alpha
Helix 80	AI8	E	53	57	Right-handed 310
Helix 81	AI9	E	67	77	Right-handed alpha
Helix 82	AJ1	E	88	106	Right-handed alpha
Helix 83	AJ2	E	122	146	Right-handed alpha
Helix 84	AJ3	E	162	172	Right-handed alpha
Helix 85	AJ4	E	188	195	Right-handed alpha
Helix 86	AJ5	E	217	233	Right-handed alpha
Helix 87	AJ6	E	244	247	Right-handed 310
Helix 88	AJ7	E	248	253	Right-handed alpha
Helix 89	AJ8	E	289	293	Right-handed 310
Helix 90	AJ9	E	319	358	Right-handed alpha
Helix 91	AK1	E	378	385	Right-handed alpha
Helix 92	AK2	E	388	398	Right-handed alpha
Helix 93	AK3	E	427	446	Right-handed alpha
Helix 94	AK4	E	452	458	Right-handed alpha
Helix 95	AK5	F	5	9	Right-handed 310
Helix 96	AK6	F	14	18	Right-handed 310
Helix 97	AK7	F	19	23	Right-handed 310
Helix 98	AK8	F	36	48	Right-handed alpha
Helix 99	AK9	F	53	57	Right-handed 310
Helix 100	AL1	F	67	77	Right-handed alpha
Helix 101	AL2	F	88	106	Right-handed alpha
Helix 102	AL3	F	122	146	Right-handed alpha
Helix 103	AL4	F	162	171	Right-handed alpha
Helix 104	AL5	F	188	195	Right-handed alpha
Helix 105	AL6	F	217	233	Right-handed alpha
Helix 106	AL7	F	244	247	Right-handed 310
Helix 107	AL8	F	248	253	Right-handed alpha
Helix 108	AL9	F	289	293	Right-handed 310
Helix 109	AM1	F	319	358	Right-handed alpha
Helix 110	AM2	F	378	385	Right-handed alpha
Helix 111	AM3	F	388	398	Right-handed alpha
Helix 112	AM4	F	427	446	Right-handed alpha
Helix 113	AM5	F	452	459	Right-handed alpha

There are 24 sheets in PDB entry 7X4Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	117	120	first strand
Strand 2	A	283	287	anti-parallel
Strand 3	A	265	270	anti-parallel
Strand 4	A	238	241	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	174	178	first strand
Strand 2	A	153	157	parallel
Strand 3	A	200	204	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	299	303	first strand
Strand 2	A	306	310	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	363	first strand
Strand 2	A	372	377	anti-parallel
Strand 3	A	416	421	anti-parallel
Strand 4	A	405	407	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	120	first strand
Strand 2	B	283	287	anti-parallel
Strand 3	B	265	271	anti-parallel
Strand 4	B	238	241	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	174	178	first strand
Strand 2	B	153	157	parallel
Strand 3	B	200	204	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	299	303	first strand
Strand 2	B	306	310	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	363	first strand
Strand 2	B	372	377	anti-parallel
Strand 3	B	416	421	anti-parallel
Strand 4	B	405	407	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	117	120	first strand
Strand 2	C	283	287	anti-parallel
Strand 3	C	265	270	anti-parallel
Strand 4	C	238	241	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	174	178	first strand
Strand 2	C	153	157	parallel
Strand 3	C	200	204	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	299	303	first strand
Strand 2	C	306	310	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	363	first strand
Strand 2	C	372	377	anti-parallel
Strand 3	C	416	421	anti-parallel
Strand 4	C	405	407	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	120	first strand
Strand 2	D	283	287	anti-parallel
Strand 3	D	265	271	anti-parallel
Strand 4	D	238	241	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	174	178	first strand
Strand 2	D	153	157	parallel
Strand 3	D	200	204	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	299	303	first strand
Strand 2	D	306	310	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	363	first strand
Strand 2	D	372	377	anti-parallel
Strand 3	D	416	421	anti-parallel
Strand 4	D	405	407	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	117	120	first strand
Strand 2	E	283	287	anti-parallel
Strand 3	E	265	270	anti-parallel
Strand 4	E	238	241	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	174	178	first strand
Strand 2	E	153	157	parallel
Strand 3	E	200	204	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	299	303	first strand
Strand 2	E	306	310	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	361	363	first strand
Strand 2	E	372	377	anti-parallel
Strand 3	E	416	421	anti-parallel
Strand 4	E	405	407	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	117	120	first strand
Strand 2	F	283	287	anti-parallel
Strand 3	F	265	270	anti-parallel
Strand 4	F	238	241	parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	174	178	first strand
Strand 2	F	153	157	parallel
Strand 3	F	200	204	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	299	303	first strand
Strand 2	F	306	310	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	361	363	first strand
Strand 2	F	372	377	anti-parallel
Strand 3	F	416	421	anti-parallel
Strand 4	F	405	407	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7X4Y

Analysis of interatomic Contacts of Structural Units in PDB entry:
7X4Y