Analysis of interatomic Contacts of Structural Units in PDB entry:
7X59

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7X59 entry

There are 5 chains in PDB entry 7X59 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASN 285
B	MET 1	ASN 285
C	MET 1	ASN 285
D	MET 1	ASN 285
E	MET 1	ASN 285

There are 65 helices in PDB entry 7X59. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	38	Right-handed 310
Helix 2	AA2	A	60	64	Right-handed 310
Helix 3	AA3	A	66	78	Right-handed alpha
Helix 4	AA4	A	92	97	Right-handed 310
Helix 5	AA5	A	98	107	Right-handed alpha
Helix 6	AA6	A	114	118	Right-handed 310
Helix 7	AA7	A	135	140	Right-handed alpha
Helix 8	AA8	A	141	146	Right-handed alpha
Helix 9	AA9	A	178	191	Right-handed alpha
Helix 10	AB1	A	201	208	Right-handed alpha
Helix 11	AB2	A	214	230	Right-handed alpha
Helix 12	AB3	A	244	255	Right-handed alpha
Helix 13	AB4	A	267	285	Right-handed alpha
Helix 14	AB5	B	34	38	Right-handed 310
Helix 15	AB6	B	60	64	Right-handed 310
Helix 16	AB7	B	66	78	Right-handed alpha
Helix 17	AB8	B	92	97	Right-handed 310
Helix 18	AB9	B	98	107	Right-handed alpha
Helix 19	AC1	B	114	118	Right-handed 310
Helix 20	AC2	B	135	140	Right-handed alpha
Helix 21	AC3	B	141	146	Right-handed alpha
Helix 22	AC4	B	178	191	Right-handed alpha
Helix 23	AC5	B	201	208	Right-handed alpha
Helix 24	AC6	B	214	230	Right-handed alpha
Helix 25	AC7	B	244	255	Right-handed alpha
Helix 26	AC8	B	267	285	Right-handed alpha
Helix 27	AC9	C	34	38	Right-handed 310
Helix 28	AD1	C	60	64	Right-handed 310
Helix 29	AD2	C	66	78	Right-handed alpha
Helix 30	AD3	C	92	97	Right-handed 310
Helix 31	AD4	C	98	107	Right-handed alpha
Helix 32	AD5	C	114	118	Right-handed 310
Helix 33	AD6	C	135	140	Right-handed alpha
Helix 34	AD7	C	141	146	Right-handed alpha
Helix 35	AD8	C	178	191	Right-handed alpha
Helix 36	AD9	C	201	208	Right-handed alpha
Helix 37	AE1	C	214	230	Right-handed alpha
Helix 38	AE2	C	244	255	Right-handed alpha
Helix 39	AE3	C	267	285	Right-handed alpha
Helix 40	AE4	D	34	38	Right-handed 310
Helix 41	AE5	D	60	64	Right-handed 310
Helix 42	AE6	D	66	78	Right-handed alpha
Helix 43	AE7	D	92	97	Right-handed 310
Helix 44	AE8	D	98	107	Right-handed alpha
Helix 45	AE9	D	114	118	Right-handed 310
Helix 46	AF1	D	135	140	Right-handed alpha
Helix 47	AF2	D	141	146	Right-handed alpha
Helix 48	AF3	D	178	191	Right-handed alpha
Helix 49	AF4	D	201	208	Right-handed alpha
Helix 50	AF5	D	214	230	Right-handed alpha
Helix 51	AF6	D	244	255	Right-handed alpha
Helix 52	AF7	D	267	285	Right-handed alpha
Helix 53	AF8	E	34	38	Right-handed 310
Helix 54	AF9	E	60	64	Right-handed 310
Helix 55	AG1	E	66	78	Right-handed alpha
Helix 56	AG2	E	92	97	Right-handed 310
Helix 57	AG3	E	98	107	Right-handed alpha
Helix 58	AG4	E	114	118	Right-handed 310
Helix 59	AG5	E	135	140	Right-handed alpha
Helix 60	AG6	E	141	146	Right-handed alpha
Helix 61	AG7	E	178	191	Right-handed alpha
Helix 62	AG8	E	201	208	Right-handed alpha
Helix 63	AG9	E	214	230	Right-handed alpha
Helix 64	AH1	E	244	255	Right-handed alpha
Helix 65	AH2	E	267	285	Right-handed alpha

There are 15 sheets in PDB entry 7X59. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	24	first strand
Strand 2	A	12	16	anti-parallel
Strand 3	A	3	7	anti-parallel
Strand 4	A	84	91	parallel
Strand 5	A	121	131	parallel
Strand 6	A	110	112	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	28	first strand
Strand 2	A	46	54	anti-parallel
Strand 3	A	40	43	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	168	175	first strand
Strand 2	A	159	165	anti-parallel
Strand 3	A	149	153	anti-parallel
Strand 4	A	239	243	parallel
Strand 5	A	262	264	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	24	first strand
Strand 2	B	12	16	anti-parallel
Strand 3	B	3	7	anti-parallel
Strand 4	B	84	91	parallel
Strand 5	B	121	131	parallel
Strand 6	B	110	112	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	28	first strand
Strand 2	B	46	54	anti-parallel
Strand 3	B	40	43	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	168	175	first strand
Strand 2	B	159	165	anti-parallel
Strand 3	B	149	153	anti-parallel
Strand 4	B	239	243	parallel
Strand 5	B	262	264	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	24	first strand
Strand 2	C	12	16	anti-parallel
Strand 3	C	3	7	anti-parallel
Strand 4	C	84	91	parallel
Strand 5	C	121	131	parallel
Strand 6	C	110	112	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	28	first strand
Strand 2	C	46	54	anti-parallel
Strand 3	C	40	43	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	168	175	first strand
Strand 2	C	159	165	anti-parallel
Strand 3	C	149	153	anti-parallel
Strand 4	C	239	243	parallel
Strand 5	C	262	264	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	24	first strand
Strand 2	D	12	16	anti-parallel
Strand 3	D	3	7	anti-parallel
Strand 4	D	84	91	parallel
Strand 5	D	121	131	parallel
Strand 6	D	110	112	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	28	first strand
Strand 2	D	46	54	anti-parallel
Strand 3	D	40	43	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	168	175	first strand
Strand 2	D	159	165	anti-parallel
Strand 3	D	149	153	anti-parallel
Strand 4	D	239	243	parallel
Strand 5	D	262	264	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	24	first strand
Strand 2	E	12	16	anti-parallel
Strand 3	E	3	7	anti-parallel
Strand 4	E	84	91	parallel
Strand 5	E	121	131	parallel
Strand 6	E	110	112	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	27	28	first strand
Strand 2	E	46	54	anti-parallel
Strand 3	E	40	43	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	168	175	first strand
Strand 2	E	159	165	anti-parallel
Strand 3	E	149	153	anti-parallel
Strand 4	E	239	243	parallel
Strand 5	E	262	264	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7X59

Analysis of interatomic Contacts of Structural Units in PDB entry:
7X59