Analysis of interatomic Contacts of Structural Units in PDB entry:
7X6W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7X6W entry

There are 2 chains in PDB entry 7X6W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 22	ALA 476
B	CYS 1	PHE 467

There are 14 helices in PDB entry 7X6W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	53	Right-handed alpha
Helix 2	AA2	A	54	65	Right-handed alpha
Helix 3	AA3	A	87	92	Right-handed alpha
Helix 4	AA4	A	97	102	Right-handed alpha
Helix 5	AA5	A	160	163	Right-handed 310
Helix 6	AA6	A	187	201	Right-handed alpha
Helix 7	AA7	A	267	275	Right-handed alpha
Helix 8	AA8	A	447	452	Right-handed alpha
Helix 9	AA9	A	453	456	Right-handed 310
Helix 10	AB1	A	460	476	Right-handed alpha
Helix 11	AB2	B	438	448	Right-handed alpha
Helix 12	AB3	B	450	456	Right-handed alpha
Helix 13	AB4	B	457	461	Right-handed 310
Helix 14	AB5	B	462	467	Right-handed alpha

There are 16 sheets in PDB entry 7X6W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	172	174	parallel
Strand 3	A	129	133	parallel
Strand 4	A	138	141	anti-parallel
Strand 5	A	109	111	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	148	first strand
Strand 2	A	157	158	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	179	180	first strand
Strand 2	A	327	334	anti-parallel
Strand 3	A	224	231	anti-parallel
Strand 4	A	238	240	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	208	first strand
Strand 2	A	211	212	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	220	first strand
Strand 2	A	337	338	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	244	248	first strand
Strand 2	A	313	317	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	257	259	first strand
Strand 2	A	304	306	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	350	352	first strand
Strand 2	A	367	371	anti-parallel
Strand 3	A	403	405	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	15	first strand
Strand 2	B	23	25	anti-parallel
Strand 3	B	330	331	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	29	first strand
Strand 2	B	322	325	anti-parallel
Strand 3	B	200	202	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	45	first strand
Strand 2	B	54	66	anti-parallel
Strand 3	B	167	175	anti-parallel
Strand 4	B	181	183	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	74	first strand
Strand 2	B	159	160	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	87	first strand
Strand 2	B	142	151	anti-parallel
Strand 3	B	126	128	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	219	first strand
Strand 2	B	226	227	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	268	272	first strand
Strand 2	B	277	281	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	350	353	first strand
Strand 2	B	363	367	anti-parallel
Strand 3	B	399	403	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7X6W

Analysis of interatomic Contacts of Structural Units in PDB entry:
7X6W