Analysis of interatomic Contacts of Structural Units in PDB entry:
7X8J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7X8J entry

There are 2 chains in PDB entry 7X8J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 357
B
 MET 1LYS 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7X8J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
16 20Right-handed 310
Helix 3
AA3
A
22 25Right-handed 310
Helix 4
AA4
A
33 43Right-handed alpha
Helix 5
AA5
A
56 59Right-handed 310
Helix 6
AA6
A
60 72Right-handed alpha
Helix 7
AA7
A
87 93Right-handed alpha
Helix 8
AA8
A
93 98Right-handed alpha
Helix 9
AA9
A
117 129Right-handed alpha
Helix 10
AB1
A
141 144Right-handed 310
Helix 11
AB2
A
181 187Right-handed 310
Helix 12
AB3
A
197 205Right-handed alpha
Helix 13
AB4
A
222 241Right-handed alpha
Helix 14
AB5
A
242 245Right-handed 310
Helix 15
AB6
B
11 15Right-handed 310
Helix 16
AB7
B
16 20Right-handed 310
Helix 17
AB8
B
22 25Right-handed 310
Helix 18
AB9
B
33 44Right-handed alpha
Helix 19
AC1
B
56 59Right-handed 310
Helix 20
AC2
B
60 72Right-handed alpha
Helix 21
AC3
B
87 93Right-handed alpha
Helix 22
AC4
B
93 98Right-handed alpha
Helix 23
AC5
B
117 129Right-handed alpha
Helix 24
AC6
B
141 144Right-handed 310
Helix 25
AC7
B
181 187Right-handed 310
Helix 26
AC8
B
197 205Right-handed alpha
Helix 27
AC9
B
222 241Right-handed alpha
Helix 28
AD1
B
242 245Right-handed 310
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There are 15 sheets in PDB entry 7X8J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
48 53parallel
Strand 3
A
2 8parallel
Strand 4
A
105 109parallel
Strand 5
A
171 179anti-parallel
Strand 6
A
132 138anti-parallel
Strand 7
A
208 212parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
31 32anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
217 219anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 150first strand
Strand 2
A
157 162anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
273 275parallel
Strand 3
A
291 292parallel
Strand 4
A
307 309parallel
Strand 5
A
325 327parallel
Strand 6
A
343 344parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
280 281parallel
Strand 3
A
297 298parallel
Strand 4
A
314 315parallel
Strand 5
A
332 333parallel
Strand 6
A
349 350parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 269first strand
Strand 2
A
286 288parallel
Strand 3
A
303 305parallel
Strand 4
A
320 322parallel
Strand 5
A
338 340parallel
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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
48 53parallel
Strand 3
B
2 8parallel
Strand 4
B
105 109parallel
Strand 5
B
171 179anti-parallel
Strand 6
B
132 138anti-parallel
Strand 7
B
208 212parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
31 32anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 114first strand
Strand 2
B
217 219anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
146 150first strand
Strand 2
B
157 162anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 257first strand
Strand 2
B
273 275parallel
Strand 3
B
291 292parallel
Strand 4
B
307 309parallel
Strand 5
B
325 327parallel
Strand 6
B
343 344parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
280 281parallel
Strand 3
B
297 298parallel
Strand 4
B
314 315parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
268 269first strand
Strand 2
B
286 288parallel
Strand 3
B
303 305parallel
Strand 4
B
320 322parallel
Strand 5
B
338 340parallel
Strand 6
B
354 355parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 333first strand
Strand 2
B
349 350parallel
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