Analysis of interatomic Contacts of Structural Units in PDB entry:
7XB6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7XB6 entry

There are 4 chains in PDB entry 7XB6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ARG 597
B	MET 1	ARG 597
C	MET 1	ARG 597
D	MET 1	ARG 597

There are109 helices in PDB entry 7XB6. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	20	Right-handed alpha
Helix 2	AA2	A	53	58	Right-handed alpha
Helix 3	AA3	A	66	77	Right-handed alpha
Helix 4	AA4	A	80	84	Right-handed 310
Helix 5	AA5	A	94	107	Right-handed alpha
Helix 6	AA6	A	111	129	Right-handed alpha
Helix 7	AA7	A	131	144	Right-handed alpha
Helix 8	AA8	A	148	150	Right-handed 310
Helix 9	AA9	A	156	170	Right-handed alpha
Helix 10	AB1	A	211	223	Right-handed alpha
Helix 11	AB2	A	231	238	Right-handed alpha
Helix 12	AB3	A	239	241	Right-handed 310
Helix 13	AB4	A	245	249	Right-handed 310
Helix 14	AB5	A	250	255	Right-handed alpha
Helix 15	AB6	A	277	287	Right-handed alpha
Helix 16	AB7	A	295	325	Right-handed alpha
Helix 17	AB8	A	334	338	Right-handed 310
Helix 18	AB9	A	339	350	Right-handed alpha
Helix 19	AC1	A	364	378	Right-handed alpha
Helix 20	AC2	A	395	405	Right-handed alpha
Helix 21	AC3	A	416	418	Right-handed 310
Helix 22	AC4	A	419	428	Right-handed alpha
Helix 23	AC5	A	461	470	Right-handed alpha
Helix 24	AC6	A	487	492	Right-handed alpha
Helix 25	AC7	A	510	514	Right-handed 310
Helix 26	AC8	A	517	521	Right-handed 310
Helix 27	AC9	A	537	552	Right-handed alpha
Helix 28	AD1	A	571	581	Right-handed alpha
Helix 29	AD2	B	11	20	Right-handed alpha
Helix 30	AD3	B	53	58	Right-handed alpha
Helix 31	AD4	B	66	76	Right-handed alpha
Helix 32	AD5	B	80	84	Right-handed 310
Helix 33	AD6	B	94	108	Right-handed alpha
Helix 34	AD7	B	111	129	Right-handed alpha
Helix 35	AD8	B	131	144	Right-handed alpha
Helix 36	AD9	B	156	170	Right-handed alpha
Helix 37	AE1	B	211	223	Right-handed alpha
Helix 38	AE2	B	231	238	Right-handed alpha
Helix 39	AE3	B	239	241	Right-handed 310
Helix 40	AE4	B	245	248	Right-handed 310
Helix 41	AE5	B	249	255	Right-handed alpha
Helix 42	AE6	B	274	276	Right-handed 310
Helix 43	AE7	B	277	287	Right-handed alpha
Helix 44	AE8	B	295	323	Right-handed alpha
Helix 45	AE9	B	334	338	Right-handed 310
Helix 46	AF1	B	339	350	Right-handed alpha
Helix 47	AF2	B	362	364	Right-handed 310
Helix 48	AF3	B	365	378	Right-handed alpha
Helix 49	AF4	B	395	404	Right-handed alpha
Helix 50	AF5	B	419	430	Right-handed alpha
Helix 51	AF6	B	461	470	Right-handed alpha
Helix 52	AF7	B	487	492	Right-handed alpha
Helix 53	AF8	B	510	514	Right-handed 310
Helix 54	AF9	B	517	521	Right-handed 310
Helix 55	AG1	B	537	552	Right-handed alpha
Helix 56	AG2	B	571	581	Right-handed alpha
Helix 57	AG3	C	11	21	Right-handed alpha
Helix 58	AG4	C	53	57	Right-handed alpha
Helix 59	AG5	C	66	78	Right-handed alpha
Helix 60	AG6	C	80	84	Right-handed 310
Helix 61	AG7	C	94	107	Right-handed alpha
Helix 62	AG8	C	111	129	Right-handed alpha
Helix 63	AG9	C	131	144	Right-handed alpha
Helix 64	AH1	C	156	170	Right-handed alpha
Helix 65	AH2	C	202	205	Right-handed 310
Helix 66	AH3	C	211	223	Right-handed alpha
Helix 67	AH4	C	231	239	Right-handed alpha
Helix 68	AH5	C	250	255	Right-handed alpha
Helix 69	AH6	C	274	276	Right-handed 310
Helix 70	AH7	C	277	287	Right-handed alpha
Helix 71	AH8	C	295	325	Right-handed alpha
Helix 72	AH9	C	334	338	Right-handed 310
Helix 73	AI1	C	339	350	Right-handed alpha
Helix 74	AI2	C	358	362	Right-handed 310
Helix 75	AI3	C	363	378	Right-handed alpha
Helix 76	AI4	C	395	405	Right-handed alpha
Helix 77	AI5	C	418	429	Right-handed alpha
Helix 78	AI6	C	461	470	Right-handed alpha
Helix 79	AI7	C	487	492	Right-handed alpha
Helix 80	AI8	C	510	514	Right-handed 310
Helix 81	AI9	C	517	521	Right-handed 310
Helix 82	AJ1	C	537	552	Right-handed alpha
Helix 83	AJ2	C	571	581	Right-handed alpha
Helix 84	AJ3	D	11	21	Right-handed alpha
Helix 85	AJ4	D	53	58	Right-handed alpha
Helix 86	AJ5	D	66	78	Right-handed alpha
Helix 87	AJ6	D	80	84	Right-handed 310
Helix 88	AJ7	D	94	108	Right-handed alpha
Helix 89	AJ8	D	111	129	Right-handed alpha
Helix 90	AJ9	D	131	144	Right-handed alpha
Helix 91	AK1	D	156	169	Right-handed alpha
Helix 92	AK2	D	211	223	Right-handed alpha
Helix 93	AK3	D	230	238	Right-handed alpha
Helix 94	AK4	D	245	248	Right-handed 310
Helix 95	AK5	D	249	254	Right-handed alpha
Helix 96	AK6	D	274	276	Right-handed 310
Helix 97	AK7	D	277	287	Right-handed alpha
Helix 98	AK8	D	295	324	Right-handed alpha
Helix 99	AK9	D	334	338	Right-handed 310
Helix 100	AL1	D	339	349	Right-handed alpha
Helix 101	AL2	D	362	364	Right-handed 310
Helix 102	AL3	D	365	378	Right-handed alpha
Helix 103	AL4	D	395	406	Right-handed alpha
Helix 104	AL5	D	416	428	Right-handed alpha
Helix 105	AL6	D	461	470	Right-handed alpha
Helix 106	AL7	D	484	492	Right-handed alpha
Helix 107	AL8	D	510	521	Right-handed 310
Helix 108	AL9	D	537	552	Right-handed alpha
Helix 109	AM1	D	571	581	Right-handed alpha

There are 22 sheets in PDB entry 7XB6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	52	first strand
Strand 2	A	38	43	anti-parallel
Strand 3	A	2	7	anti-parallel
Strand 4	A	86	89	parallel
Strand 5	A	152	154	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	197	207	first strand
Strand 2	A	186	194	anti-parallel
Strand 3	A	174	179	anti-parallel
Strand 4	A	329	333	parallel
Strand 5	A	354	356	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	259	first strand
Strand 2	A	263	266	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	410	414	first strand
Strand 2	A	592	596	anti-parallel
Strand 3	A	586	589	anti-parallel
Strand 4	A	434	437	parallel
Strand 5	A	451	455	anti-parallel
Strand 6	A	556	560	anti-parallel
Strand 7	A	481	484	anti-parallel
Strand 8	A	530	532	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	507	508	first strand
Strand 2	A	526	527	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	52	first strand
Strand 2	B	38	43	anti-parallel
Strand 3	B	2	7	anti-parallel
Strand 4	B	86	89	parallel
Strand 5	B	152	154	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	200	first strand
Strand 2	B	186	194	anti-parallel
Strand 3	B	206	207	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	200	first strand
Strand 2	B	186	194	anti-parallel
Strand 3	B	174	179	anti-parallel
Strand 4	B	329	333	parallel
Strand 5	B	354	356	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	259	first strand
Strand 2	B	263	266	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	410	411	first strand
Strand 2	B	592	596	anti-parallel
Strand 3	B	586	589	anti-parallel
Strand 4	B	433	437	parallel
Strand 5	B	451	455	anti-parallel
Strand 6	B	555	560	anti-parallel
Strand 7	B	480	484	anti-parallel
Strand 8	B	530	532	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	507	508	first strand
Strand 2	B	526	527	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	52	first strand
Strand 2	C	38	43	anti-parallel
Strand 3	C	2	7	anti-parallel
Strand 4	C	86	89	parallel
Strand 5	C	152	154	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	197	200	first strand
Strand 2	C	186	194	anti-parallel
Strand 3	C	206	207	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	197	200	first strand
Strand 2	C	186	194	anti-parallel
Strand 3	C	174	179	anti-parallel
Strand 4	C	329	333	parallel
Strand 5	C	354	356	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	256	259	first strand
Strand 2	C	263	266	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	410	414	first strand
Strand 2	C	592	596	anti-parallel
Strand 3	C	586	589	anti-parallel
Strand 4	C	434	437	parallel
Strand 5	C	451	455	anti-parallel
Strand 6	C	556	560	anti-parallel
Strand 7	C	480	484	anti-parallel
Strand 8	C	530	532	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	507	508	first strand
Strand 2	C	526	527	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	52	first strand
Strand 2	D	38	43	anti-parallel
Strand 3	D	2	7	anti-parallel
Strand 4	D	86	89	parallel
Strand 5	D	152	154	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	207	first strand
Strand 2	D	186	193	anti-parallel
Strand 3	D	174	179	anti-parallel
Strand 4	D	329	333	parallel
Strand 5	D	354	356	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	256	259	first strand
Strand 2	D	263	266	anti-parallel

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There are 8 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	410	414	first strand
Strand 2	D	592	596	anti-parallel
Strand 3	D	586	589	anti-parallel
Strand 4	D	434	437	parallel
Strand 5	D	451	455	anti-parallel
Strand 6	D	556	560	anti-parallel
Strand 7	D	481	483	anti-parallel
Strand 8	D	530	531	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	507	508	first strand
Strand 2	D	526	527	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7XB6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7XB6