Analysis of interatomic Contacts of Structural Units in PDB entry:
7XBF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XBF entry

There are 3 chains in PDB entry 7XBF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ALA 614
B
 VAL 314ASN 522
C
 SER 19THR 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 80 helices in PDB entry 7XBF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 52Right-handed alpha
Helix 2
AA2
A
55 83Right-handed alpha
Helix 3
AA3
A
84 88Right-handed 310
Helix 4
AA4
A
90 102Right-handed alpha
Helix 5
AA5
A
104 108Right-handed 310
Helix 6
AA6
A
109 129Right-handed alpha
Helix 7
AA7
A
149 155Right-handed alpha
Helix 8
AA8
A
157 172Right-handed alpha
Helix 9
AA9
A
172 194Right-handed alpha
Helix 10
AB1
A
198 205Right-handed alpha
Helix 11
AB2
A
206 208Right-handed 310
Helix 12
AB3
A
218 232Right-handed alpha
Helix 13
AB4
A
233 252Right-handed alpha
Helix 14
AB5
A
265 267Right-handed 310
Helix 15
AB6
A
275 277Right-handed 310
Helix 16
AB7
A
278 283Right-handed alpha
Helix 17
AB8
A
293 300Right-handed alpha
Helix 18
AB9
A
303 318Right-handed alpha
Helix 19
AC1
A
324 331Right-handed alpha
Helix 20
AC2
A
365 385Right-handed alpha
Helix 21
AC3
A
389 393Right-handed 310
Helix 22
AC4
A
397 413Right-handed alpha
Helix 23
AC5
A
414 422Right-handed alpha
Helix 24
AC6
A
431 447Right-handed alpha
Helix 25
AC7
A
448 466Right-handed alpha
Helix 26
AC8
A
469 471Right-handed 310
Helix 27
AC9
A
472 484Right-handed alpha
Helix 28
AD1
A
499 502Right-handed 310
Helix 29
AD2
A
503 508Right-handed alpha
Helix 30
AD3
A
512 533Right-handed alpha
Helix 31
AD4
A
547 561Right-handed alpha
Helix 32
AD5
A
565 574Right-handed alpha
Helix 33
AD6
A
581 588Right-handed alpha
Helix 34
AD7
A
588 598Right-handed alpha
Helix 35
AD8
B
325 330Right-handed alpha
Helix 36
AD9
B
336 340Right-handed 310
Helix 37
AE1
B
352 358Right-handed alpha
Helix 38
AE2
B
392 394Right-handed 310
Helix 39
AE3
B
403 409Right-handed alpha
Helix 40
AE4
B
488 491Right-handed 310
Helix 41
AE5
C
20 53Right-handed alpha
Helix 42
AE6
C
55 81Right-handed alpha
Helix 43
AE7
C
90 101Right-handed alpha
Helix 44
AE8
C
103 108Right-handed 310
Helix 45
AE9
C
109 130Right-handed alpha
Helix 46
AF1
C
146 155Right-handed alpha
Helix 47
AF2
C
157 194Right-handed alpha
Helix 48
AF3
C
198 204Right-handed alpha
Helix 49
AF4
C
205 208Right-handed 310
Helix 50
AF5
C
220 252Right-handed alpha
Helix 51
AF6
C
265 267Right-handed 310
Helix 52
AF7
C
275 277Right-handed 310
Helix 53
AF8
C
278 283Right-handed alpha
Helix 54
AF9
C
293 300Right-handed alpha
Helix 55
AG1
C
303 318Right-handed alpha
Helix 56
AG2
C
324 331Right-handed alpha
Helix 57
AG3
C
365 385Right-handed alpha
Helix 58
AG4
C
386 388Right-handed 310
Helix 59
AG5
C
389 393Right-handed 310
Helix 60
AG6
C
399 414Right-handed alpha
Helix 61
AG7
C
414 421Right-handed alpha
Helix 62
AG8
C
431 447Right-handed alpha
Helix 63
AG9
C
448 466Right-handed alpha
Helix 64
AH1
C
469 471Right-handed 310
Helix 65
AH2
C
472 484Right-handed alpha
Helix 66
AH3
C
499 502Right-handed 310
Helix 67
AH4
C
503 508Right-handed alpha
Helix 68
AH5
C
512 533Right-handed alpha
Helix 69
AH6
C
538 542Right-handed 310
Helix 70
AH7
C
547 559Right-handed alpha
Helix 71
AH8
C
565 574Right-handed alpha
Helix 72
AH9
C
581 588Right-handed alpha
Helix 73
AI1
C
588 599Right-handed alpha
Helix 74
AI2
D
324 330Right-handed alpha
Helix 75
AI3
D
336 340Right-handed 310
Helix 76
AI4
D
352 358Right-handed alpha
Helix 77
AI5
D
370 375Right-handed alpha
Helix 78
AI6
D
392 397Right-handed 310
Helix 79
AI7
D
403 409Right-handed alpha
Helix 80
AI8
D
425 430Right-handed alpha
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There are 13 sheets in PDB entry 7XBF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
141 143anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 344first strand
Strand 2
B
381 390anti-parallel
Strand 3
B
493 502anti-parallel
Strand 4
B
419 423anti-parallel
Strand 5
B
363 365anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 441first strand
Strand 2
B
478 480anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
460 461first strand
Strand 2
B
474 475anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 133first strand
Strand 2
C
141 142anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
262 263first strand
Strand 2
C
487 488parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
347 352first strand
Strand 2
C
355 359anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
341 345first strand
Strand 2
D
381 390anti-parallel
Strand 3
D
493 502anti-parallel
Strand 4
D
418 424anti-parallel
Strand 5
D
363 367anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
348 349first strand
Strand 2
D
510 511parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
438 441first strand
Strand 2
D
478 481anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
460 461first strand
Strand 2
D
474 475anti-parallel
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