Analysis of interatomic Contacts of Structural Units in PDB entry:
7XC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XC8 entry

There is 1 chain in PDB entry 7XC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 27GLU 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7XC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 44Right-handed alpha
Helix 2
AA2
A
50 52Right-handed 310
Helix 3
AA3
A
53 59Right-handed alpha
Helix 4
AA4
A
66 71Right-handed alpha
Helix 5
AA5
A
72 74Right-handed 310
Helix 6
AA6
A
114 120Right-handed alpha
Helix 7
AA7
A
125 131Right-handed alpha
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There are 3 sheets in PDB entry 7XC8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 37first strand
Strand 2
A
110 113parallel
Strand 3
A
62 65anti-parallel
Strand 4
A
95 102parallel
Strand 5
A
79 84anti-parallel
Strand 6
A
135 142anti-parallel
Strand 7
A
30 37anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 198first strand
Strand 2
A
201 204anti-parallel
Strand 3
A
165 170anti-parallel
Strand 4
A
152 155anti-parallel
Strand 5
A
242 244anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
178 185anti-parallel
Strand 3
A
212 220anti-parallel
Strand 4
A
223 233anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il