Analysis of interatomic Contacts of Structural Units in PDB entry:
7XDF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XDF entry

There are 4 chains in PDB entry 7XDF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 23PRO 573
B
 GLU 23PRO 573
C
 GLU 23PRO 573
D
 GLU 23PRO 573
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are112 helices in PDB entry 7XDF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 31Right-handed alpha
Helix 2
AA2
A
36 40Right-handed 310
Helix 3
AA3
A
41 48Right-handed alpha
Helix 4
AA4
A
60 75Right-handed alpha
Helix 5
AA5
A
77 92Right-handed alpha
Helix 6
AA6
A
92 103Right-handed alpha
Helix 7
AA7
A
103 112Right-handed alpha
Helix 8
AA8
A
114 124Right-handed alpha
Helix 9
AA9
A
142 148Right-handed alpha
Helix 10
AB1
A
172 176Right-handed 310
Helix 11
AB2
A
177 190Right-handed alpha
Helix 12
AB3
A
194 196Right-handed 310
Helix 13
AB4
A
209 215Right-handed alpha
Helix 14
AB5
A
228 247Right-handed alpha
Helix 15
AB6
A
258 270Right-handed alpha
Helix 16
AB7
A
281 298Right-handed alpha
Helix 17
AB8
A
313 330Right-handed alpha
Helix 18
AB9
A
333 339Right-handed alpha
Helix 19
AC1
A
376 385Right-handed alpha
Helix 20
AC2
A
400 411Right-handed alpha
Helix 21
AC3
A
429 437Right-handed alpha
Helix 22
AC4
A
466 469Right-handed 310
Helix 23
AC5
A
470 481Right-handed alpha
Helix 24
AC6
A
487 501Right-handed alpha
Helix 25
AC7
A
503 510Right-handed alpha
Helix 26
AC8
A
515 517Right-handed 310
Helix 27
AC9
A
518 537Right-handed alpha
Helix 28
AD1
A
548 557Right-handed alpha
Helix 29
AD2
B
25 31Right-handed alpha
Helix 30
AD3
B
36 40Right-handed 310
Helix 31
AD4
B
41 48Right-handed alpha
Helix 32
AD5
B
60 75Right-handed alpha
Helix 33
AD6
B
77 92Right-handed alpha
Helix 34
AD7
B
92 103Right-handed alpha
Helix 35
AD8
B
103 112Right-handed alpha
Helix 36
AD9
B
114 124Right-handed alpha
Helix 37
AE1
B
142 148Right-handed alpha
Helix 38
AE2
B
172 176Right-handed 310
Helix 39
AE3
B
177 190Right-handed alpha
Helix 40
AE4
B
194 196Right-handed 310
Helix 41
AE5
B
209 215Right-handed alpha
Helix 42
AE6
B
228 247Right-handed alpha
Helix 43
AE7
B
258 270Right-handed alpha
Helix 44
AE8
B
281 298Right-handed alpha
Helix 45
AE9
B
313 330Right-handed alpha
Helix 46
AF1
B
333 339Right-handed alpha
Helix 47
AF2
B
376 385Right-handed alpha
Helix 48
AF3
B
400 411Right-handed alpha
Helix 49
AF4
B
429 437Right-handed alpha
Helix 50
AF5
B
466 469Right-handed 310
Helix 51
AF6
B
470 481Right-handed alpha
Helix 52
AF7
B
487 501Right-handed alpha
Helix 53
AF8
B
503 510Right-handed alpha
Helix 54
AF9
B
515 517Right-handed 310
Helix 55
AG1
B
518 537Right-handed alpha
Helix 56
AG2
B
548 557Right-handed alpha
Helix 57
AG3
C
25 31Right-handed alpha
Helix 58
AG4
C
36 40Right-handed 310
Helix 59
AG5
C
41 48Right-handed alpha
Helix 60
AG6
C
60 75Right-handed alpha
Helix 61
AG7
C
77 92Right-handed alpha
Helix 62
AG8
C
92 103Right-handed alpha
Helix 63
AG9
C
103 112Right-handed alpha
Helix 64
AH1
C
114 124Right-handed alpha
Helix 65
AH2
C
142 148Right-handed alpha
Helix 66
AH3
C
172 176Right-handed 310
Helix 67
AH4
C
177 190Right-handed alpha
Helix 68
AH5
C
194 196Right-handed 310
Helix 69
AH6
C
209 215Right-handed alpha
Helix 70
AH7
C
228 247Right-handed alpha
Helix 71
AH8
C
258 270Right-handed alpha
Helix 72
AH9
C
281 298Right-handed alpha
Helix 73
AI1
C
313 330Right-handed alpha
Helix 74
AI2
C
333 339Right-handed alpha
Helix 75
AI3
C
376 385Right-handed alpha
Helix 76
AI4
C
400 411Right-handed alpha
Helix 77
AI5
C
429 437Right-handed alpha
Helix 78
AI6
C
466 469Right-handed 310
Helix 79
AI7
C
470 481Right-handed alpha
Helix 80
AI8
C
487 501Right-handed alpha
Helix 81
AI9
C
503 510Right-handed alpha
Helix 82
AJ1
C
515 517Right-handed 310
Helix 83
AJ2
C
518 537Right-handed alpha
Helix 84
AJ3
C
548 557Right-handed alpha
Helix 85
AJ4
D
25 31Right-handed alpha
Helix 86
AJ5
D
36 40Right-handed 310
Helix 87
AJ6
D
41 48Right-handed alpha
Helix 88
AJ7
D
60 75Right-handed alpha
Helix 89
AJ8
D
77 92Right-handed alpha
Helix 90
AJ9
D
92 103Right-handed alpha
Helix 91
AK1
D
103 112Right-handed alpha
Helix 92
AK2
D
114 124Right-handed alpha
Helix 93
AK3
D
142 148Right-handed alpha
Helix 94
AK4
D
172 176Right-handed 310
Helix 95
AK5
D
177 190Right-handed alpha
Helix 96
AK6
D
194 196Right-handed 310
Helix 97
AK7
D
209 215Right-handed alpha
Helix 98
AK8
D
228 247Right-handed alpha
Helix 99
AK9
D
258 270Right-handed alpha
Helix 100
AL1
D
281 298Right-handed alpha
Helix 101
AL2
D
313 330Right-handed alpha
Helix 102
AL3
D
333 339Right-handed alpha
Helix 103
AL4
D
376 385Right-handed alpha
Helix 104
AL5
D
400 411Right-handed alpha
Helix 105
AL6
D
429 437Right-handed alpha
Helix 106
AL7
D
466 469Right-handed 310
Helix 107
AL8
D
470 481Right-handed alpha
Helix 108
AL9
D
487 501Right-handed alpha
Helix 109
AM1
D
503 510Right-handed alpha
Helix 110
AM2
D
515 517Right-handed 310
Helix 111
AM3
D
518 537Right-handed alpha
Helix 112
AM4
D
548 557Right-handed alpha
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There are 8 sheets in PDB entry 7XDF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 136first strand
Strand 2
A
198 204parallel
Strand 3
A
157 161parallel
Strand 4
A
251 255parallel
Strand 5
A
274 275parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 344first strand
Strand 2
A
307 310parallel
Strand 3
A
388 391parallel
Strand 4
A
415 418parallel
Strand 5
A
442 445parallel
Strand 6
A
463 464parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 136first strand
Strand 2
B
198 204parallel
Strand 3
B
157 161parallel
Strand 4
B
251 255parallel
Strand 5
B
274 275parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 344first strand
Strand 2
B
307 310parallel
Strand 3
B
388 391parallel
Strand 4
B
415 418parallel
Strand 5
B
442 445parallel
Strand 6
B
463 464parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
133 136first strand
Strand 2
C
198 204parallel
Strand 3
C
157 161parallel
Strand 4
C
251 255parallel
Strand 5
C
274 275parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
341 344first strand
Strand 2
C
307 310parallel
Strand 3
C
388 391parallel
Strand 4
C
415 418parallel
Strand 5
C
442 445parallel
Strand 6
C
463 464parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
133 136first strand
Strand 2
D
198 204parallel
Strand 3
D
157 161parallel
Strand 4
D
251 255parallel
Strand 5
D
274 275parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
341 344first strand
Strand 2
D
307 310parallel
Strand 3
D
388 391parallel
Strand 4
D
415 418parallel
Strand 5
D
442 445parallel
Strand 6
D
463 464parallel
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