Analysis of interatomic Contacts of Structural Units in PDB entry:
7XDV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XDV entry

There are 2 chains in PDB entry 7XDV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 26GLU 320
B
 ARG 27SER 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7XDV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 38Right-handed alpha
Helix 2
AA2
A
42 44Right-handed 310
Helix 3
AA3
A
76 91Right-handed alpha
Helix 4
AA4
A
123 127Right-handed 310
Helix 5
AA5
A
136 157Right-handed alpha
Helix 6
AA6
A
206 210Right-handed 310
Helix 7
AA7
A
211 212Right-handed 310
Helix 8
AA8
A
213 218Right-handed alpha
Helix 9
AA9
A
222 239Right-handed alpha
Helix 10
AB1
A
248 252Right-handed 310
Helix 11
AB2
A
253 264Right-handed alpha
Helix 12
AB3
A
266 270Right-handed 310
Helix 13
AB4
A
272 276Right-handed 310
Helix 14
AB5
A
280 295Right-handed alpha
Helix 15
AB6
A
298 302Right-handed 310
Helix 16
AB7
A
304 320Right-handed alpha
Helix 17
AB8
B
30 39Right-handed alpha
Helix 18
AB9
B
42 44Right-handed 310
Helix 19
AC1
B
76 91Right-handed alpha
Helix 20
AC2
B
123 127Right-handed 310
Helix 21
AC3
B
136 157Right-handed alpha
Helix 22
AC4
B
206 210Right-handed 310
Helix 23
AC5
B
211 212Right-handed 310
Helix 24
AC6
B
213 218Right-handed alpha
Helix 25
AC7
B
221 239Right-handed alpha
Helix 26
AC8
B
248 252Right-handed 310
Helix 27
AC9
B
253 264Right-handed alpha
Helix 28
AD1
B
266 271Right-handed 310
Helix 29
AD2
B
272 276Right-handed 310
Helix 30
AD3
B
280 295Right-handed alpha
Helix 31
AD4
B
298 302Right-handed 310
Helix 32
AD5
B
304 320Right-handed alpha
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There are 6 sheets in PDB entry 7XDV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
101 105parallel
Strand 3
A
112 116anti-parallel
Strand 4
A
65 72anti-parallel
Strand 5
A
53 60anti-parallel
Strand 6
A
46 49anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
189 190anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
180 182anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 50first strand
Strand 2
B
53 60anti-parallel
Strand 3
B
65 72anti-parallel
Strand 4
B
111 116anti-parallel
Strand 5
B
101 105anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
189 190anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
180 182anti-parallel
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