Analysis of interatomic Contacts of Structural Units in PDB entry:
7XF1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7XF1 entry

There are 2 chains in PDB entry 7XF1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4LYS 625
B
 T 1 T 11
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 7XF1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
15 17Right-handed 310
Helix 3
AA3
A
18 31Right-handed alpha
Helix 4
AA4
A
40 43Right-handed 310
Helix 5
AA5
A
44 59Right-handed alpha
Helix 6
AA6
A
68 79Right-handed alpha
Helix 7
AA7
A
82 89Right-handed alpha
Helix 8
AA8
A
95 99Right-handed 310
Helix 9
AA9
A
101 113Right-handed alpha
Helix 10
AB1
A
114 122Right-handed alpha
Helix 11
AB2
A
129 140Right-handed alpha
Helix 12
AB3
A
146 154Right-handed alpha
Helix 13
AB4
A
158 163Right-handed alpha
Helix 14
AB5
A
172 182Right-handed alpha
Helix 15
AB6
A
183 188Right-handed 310
Helix 16
AB7
A
194 208Right-handed alpha
Helix 17
AB8
A
237 239Right-handed 310
Helix 18
AB9
A
240 249Right-handed alpha
Helix 19
AC1
A
255 264Right-handed alpha
Helix 20
AC2
A
275 287Right-handed alpha
Helix 21
AC3
A
305 319Right-handed alpha
Helix 22
AC4
A
328 346Right-handed alpha
Helix 23
AC5
A
370 380Right-handed alpha
Helix 24
AC6
A
398 405Right-handed alpha
Helix 25
AC7
A
420 424Right-handed 310
Helix 26
AC8
A
441 459Right-handed alpha
Helix 27
AC9
A
469 485Right-handed alpha
Helix 28
AD1
A
496 510Right-handed alpha
Helix 29
AD2
A
519 523Right-handed 310
Helix 30
AD3
A
536 540Right-handed 310
Helix 31
AD4
A
558 569Right-handed alpha
Helix 32
AD5
A
569 586Right-handed alpha
Helix 33
AD6
A
603 607Right-handed 310
Helix 34
AD7
A
610 612Right-handed 310
Helix 35
AD8
A
613 621Right-handed alpha
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There are 3 sheets in PDB entry 7XF1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 92first strand
Strand 2
A
190 193parallel
Strand 3
A
63 66parallel
Strand 4
A
230 235parallel
Strand 5
A
381 388parallel
Strand 6
A
34 38parallel
Strand 7
A
412 414parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 254first strand
Strand 2
A
362 365anti-parallel
Strand 3
A
351 353anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 429first strand
Strand 2
A
597 601parallel
Strand 3
A
545 548parallel
Strand 4
A
463 466parallel
Strand 5
A
515 518parallel
Strand 6
A
488 490parallel
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